Gossypium hirsutum (upland cotton): 107922006
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Entry
107922006 CDS
T04793
Name
(RefSeq) proteasome subunit alpha type-1-A-like
KO
K02725
20S proteasome subunit alpha 6 [EC:
3.4.25.1
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
107922006
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107922006
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ghi03051
]
107922006
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107922006
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
107922006
Peptidases and inhibitors [BR:
ghi01002
]
Threonine peptidases
Family T1: proteasome family
107922006
Proteasome [BR:
ghi03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
107922006
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107922006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Motif
Other DBs
NCBI-GeneID:
107922006
NCBI-ProteinID:
XP_040943189
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All DBs
Position
D01:18987121..18989493
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AA seq
273 aa
AA seq
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MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ
KKIFKVDDHIGVAIAGLTADGRVLSRYMRNECINYNFTYESPLPVGRLVVQLADKAQVCT
QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFA
DSSRDDLVKDALMAIRETLQGETLKSSICTVAVVGVGEPFHILDQETVQQMINAFEIVGE
QEGPAAEPDAAAGQEAAAEQGGSTDEGVAPMDI
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgttcaggaaccagtacgatacagacgttaccacatggagtcctgcggggcggttgttc
caagtggaatacgcgatggaagctgtgaagcaaggttcagccgcgatcggacttcgatct
aagacccatgtagttttgggttgcgtcaacaaggctaactccgagttgtcttctcaccag
aaaaagattttcaaagtcgacgaccacatcggcgttgccatcgccggtctcaccgctgac
ggccgcgtcctttctcggtatatgagaaacgagtgtattaactacaacttcacgtatgaa
tcgccacttcctgttggcagacttgtcgtccaacttgccgataaagctcaggtctgcacc
caacgctcttggaaacgaccttatggggttggcctgttggtggctggcttggatgaatct
ggggctcatctctactacaactgtccgagtggaaattactttgagtaccaggcttttgcc
attgggtcccgctcacaagctgcaaagacgtacttggagcggaggtttgagaacttcgca
gattcctctcgagacgatctggtcaaagatgctcttatggctataagggaaaccctgcaa
ggagaaactctaaaaagctctatatgtacagttgctgtggtaggggttggagagccattc
catattttggatcaggaaactgtacaacaaatgatcaatgcctttgagatcgtgggagag
caagaaggaccagctgctgaacctgatgctgctgcaggacaagaggctgcagctgagcag
ggtggttctactgacgaaggcgtggccccaatggatatttaa
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