Gossypium hirsutum (upland cotton): 107922028
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Entry
107922028 CDS
T04793
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107922028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107922028
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107922028
03012 Translation factors [BR:
ghi03012
]
107922028
04131 Membrane trafficking [BR:
ghi04131
]
107922028
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107922028
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
107922028
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
107922028
Translation factors [BR:
ghi03012
]
Eukaryotic type
Elongation factors
107922028
Membrane trafficking [BR:
ghi04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
107922028
Exosome [BR:
ghi04147
]
Exosomal proteins
Proteins found in most exosomes
107922028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
AAA_22
SRPRB
FlpD
Motif
Other DBs
NCBI-GeneID:
107922028
NCBI-ProteinID:
XP_016707341
UniProt:
Q3LUM5
A0A1U8KY64
LinkDB
All DBs
Position
D01:16990984..16993298
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALTEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AELLTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVEKEDPTGAKVTKSAAKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggaaaagactcacattaacattgtggttatcggccacgtcgattctgggaaa
tcaaccaccactggccacctgatttacaagcttggtggtattgacaagcgtgtgattgaa
aggttcgagaaagaagctgctgagatgaacaagaggtcattcaagtatgcttgggtgctt
gacaagctcaaggctgagcgtgagcgtggtatcaccattgatattgccttgtggaaattt
gagaccacgaaatactactgcactgtgattgatgcacctggacaccgtgactttatcaag
aatatgattactggtacgtcacaggctgactgtgctgttttgattattgattccaccact
ggtggttttgaggctggtatctccaaggatggtcagactcgtgagcacgcattgcttgct
tttacccttggtgtcaagcaaatgatttgctgttgcaacaagatggatgccactacccct
aaatactcgaaggctaggtatgatgaaattgtgaaggaagtctcttcctacttgaagaag
gtgggatacaaccctgacaagattccatttgttcccatttctggttttgagggtgacaac
atgattgagaggtctaccaacttggactggtacaagggccctactcttcttgaggctctt
gaccagatcaatgagcccaagaggccttcagacaagcctctccgtctcccacttcaggat
gtgtacaagattggtggtattggaactgttccagttggtcgtgttgaaaccggtgtcttg
aagcctggtatggttgtgacatttggcccttctggtctgacaaccgaagttaagtcagtt
gagatgcaccatgaagctcttacagaggcacttcctggtgataatgttgggttcaatgtt
aaaaacgttgctgttaaggatctcaagcgtggttttgttgcatccaactccaaggatgac
cctgctaaggaggctgccaacttcacttctcaggtcatcattatgaaccaccctggacaa
attggaaatggatatgctccagtccttgactgccacacatcacacattgctgttaagttt
gctgagcttttgaccaagattgacaggcgatctggtaaggagcttgagaaggaacccaag
ttcttgaagaatggtgatgctggtatgattaagatgattcctaccaagcccatggttgtg
gagaccttctctgagtacccacccctgggtcgttttgctgtgagggacatgcgtcagacc
gtggctgtgggtgttatcaagagtgtcgagaaggaggacccaaccggtgccaaggtcacc
aagtctgctgctaagaagaagtga
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