Gossypium hirsutum (upland cotton): 107922178
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Entry
107922178 CDS
T04793
Name
(RefSeq) alpha-L-arabinofuranosidase 1
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00520
Amino sugar and nucleotide sugar metabolism
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
107922178
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
107922178
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Gene cluster
GFIT
Motif
Pfam:
ASD1_dom
Alpha-L-AF_C
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
107922178
NCBI-ProteinID:
XP_016707558
UniProt:
A0A1U8KYP6
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Position
A01:113806109..113816499
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AA seq
675 aa
AA seq
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MGYWKVPCVFLLCLFISFCLPCQLLADEVDKNLTAQLFIDASERSSRPIPQTLFGIFFEE
INHAGAGGLWAELVSNRGFEAGGANIPSNIDPWSIIGDESSIIVSTDRSSCFERNKVALK
MEVLCNSEGTHICPSGGVGIYNPGFWGMNIEQGKSYKIVIYVRSTGEIDISVSFTSSDGL
QTLSSTNIKASASDVSNWTKMEVLLEAKETNRNSRLQLTTSKNGVVWFDQVSAMPLDTYK
GHGFRNELVEMLADIKPRFIRFPGGCFVEGEWLRNAFRWKASVGPWEERPGHFGDVWMYW
TDDGLGYFEFLQLAEDLGALPIWVFNNGISHNDQVDTSSVLPFVQEALDGIEFARGDASS
TWGAVRAAMGHPDPFDLKYVAIGNEDCGKKNYRGNYLKFYDAIKRAYPDIEIITNCDGSS
RPLDHPTDLYDFHVYTSANNLFSMSHQFDRTTRQGPKAFVSEYAVTGKDAGTGSLLAALA
EAAFLIGLEKNSDVVHMASYAPLFVNSNDRRWNPDAIVFNSFQAYGTPSYWVQRFFTESS
GAILLNATLQKDSSNSLVASAITWKNSEAGQTYIRIKVVNFGSNSVNLQISVDGLDPNSV
KLSGSTKTTLTSANLMDENSFKEPKKVAPIQTLLEDAHKEMSVLLLPHSFTSFDLLKESA
SLRITEDDSSLVSSI
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgggttattggaaggttccttgtgtgtttttactatgcctcttcatcagtttctgcctt
ccctgtcaattgttggctgatgaggttgacaaaaacctgacagctcagctgtttatagat
gcttccgaacggtcaagccgtccaatacctcaaacactgtttggaatattctttgaggag
atcaaccatgctggtgctggtgggctgtgggcagagcttgtaagcaacagaggatttgaa
gctgggggtgctaatattccttcaaacattgacccatggtccataattggggacgaatca
tctataattgtatcaacagaccggtcgtcctgttttgaacgtaacaaggtggctctcaaa
atggaggtgctctgtaatagtgagggcactcatatctgtccatctggaggagttggtata
tataacccagggttctggggcatgaatattgagcaagggaagagctacaagatcgtaatt
tatgttcgctcaacaggagaaattgacatttctgtatcttttacgagctcagatggcttg
cagacactctcctccaccaacataaaagcttctgcttctgatgtttcaaactggacaaag
atggaggttctgttggaagccaaggaaacaaatcgcaattcaaggctgcaactaacaaca
tcgaaaaatggtgtggtatggtttgatcaagtttcagctatgcctttggacacttacaag
gggcatggtttccgaaatgagcttgttgaaatgcttgcagatatcaaacctcgctttatt
agatttccaggtggctgttttgtggaaggtgaatggttaagaaatgcttttcgctggaaa
gcaagtgttggaccttgggaagaaagaccagggcactttggtgacgtttggatgtactgg
actgatgatggacttggttactttgagtttcttcaattagcagaggatcttggtgcattg
ccaatatgggtgttcaacaatggaattagtcataatgatcaagttgatacatccagtgtt
ctgccttttgtgcaagaggcccttgatggcattgagtttgctagaggtgatgctagttct
acatggggtgctgttcgagctgcaatgggacaccctgaccctttcgatttgaaatatgtt
gctattgggaatgaggattgtgggaagaagaattatcgaggaaattacctcaagttctat
gatgctataaagcgggcctacccagatatcgaaatcattacaaactgtgatggatcttct
cgcccgcttgaccacccaactgatctttatgattttcatgtttatacatctgcgaacaac
ttgttttccatgtcccatcaatttgatcgtacaacacgacagggtccaaaggcctttgtt
agtgaatatgctgtgactgggaaagatgctggcactggaagtcttttagcagcacttgcg
gaggctgcattccttattggtctggaaaagaacagcgatgttgtgcatatggctagctat
gcaccactttttgtgaattccaatgacagacggtggaacccagatgcaatcgtcttcaac
tcctttcaggcgtatggaactcctagctactgggtgcaacgttttttcacagaatcaagt
ggagcaattcttcttaatgcaacactgcaaaaagattcctctaattcccttgttgcatct
gcaattacttggaaaaattcagaggctggtcaaacctacataaggataaaggttgtaaac
tttgggagcaattcagtcaacctccaaatttctgttgatggattggatccaaattctgta
aagctgtctggatcaacaaagaccactctcacatctgctaatctgatggatgagaattcc
ttcaaggagccaaagaaggtcgcacctattcaaacactgctggaagatgcgcacaaggag
atgagtgtgctactgctaccacattctttcacttcatttgatttgttaaaagagtctgcg
agtcttagaattacagaagatgattcttctctcgtatcttccatctga
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