Gossypium hirsutum (upland cotton): 107922237
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Entry
107922237 CDS
T04793
Name
(RefSeq) ubiquitin domain-containing protein DSK2a
KO
K04523
ubiquilin
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107922237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107922237
03051 Proteasome [BR:
ghi03051
]
107922237
Membrane trafficking [BR:
ghi04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
107922237
Proteasome [BR:
ghi03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
107922237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
Ubiquitin_2
Dsc3_N
XPC-binding
RAWUL
TBK1_ULD
Rad60-SLD_2
UBA_NBR1_C
RPW8
Motif
Other DBs
NCBI-GeneID:
107922237
NCBI-ProteinID:
XP_016707645
UniProt:
A0A1U8KYW9
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All DBs
Position
D01:57108333..57113072
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AA seq
551 aa
AA seq
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MGGEGDSSESRLGTNGEDEGLLVNIRCSNGSKFTVRTSLESTVGVFKSLLAQNCDVPADQ
QRLIYKGRVLKDDQTLQSYGLQADHTIHMVRSFTPSSSIPPPAATTNTATPNSTPGVTRG
VGSNEGAGLGASSFPGLNALGGNGGLGLFGSGLPEFEQVQQQLTQNPNMMSELMNTPAIQ
SLMNNPELMRSLIVSNPQMREIIDQNPELGHILNDPSILQQTLEAARNPELMREMMRNTD
RAMSNIESSPEGFNMLRRMYENVQEPFMNATTMAGNNGNSPSSNPFAALLSNLGDSQARS
LPNNTSTNGSETTHGQTSPNTNPLPNPWGNTVGGGGAQTNATARSNPAGDARAPGLGGLG
GLGLPDVPPMMNGMPDASQLTQLLQNPALSQMMQSIVSNPQYMNQIMNLNPQLRGMFDLN
PQLREMMQNPEVLRQMFSPETMQQMLGLQQSLLSQLNQQQSTWDSSETGATTGAPGAAGL
ESLMNMFGGLGAGSLSVPNQPDVPPEELYATQLSQLQEMGFYDTVENIRALRATAGNVHA
AVERLLGNPGQ
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgggtggggaaggcgattcgagtgagtcacgactcggtaccaatggagaagatgaggga
ctgctggttaacatccgttgctcaaatggttcaaaatttacggtgaggaccagcctcgaa
tcaaccgttggagttttcaaatctcttttggctcagaattgcgatgtcccagctgatcag
caacgtttgatttataaaggccgagtcttgaaggacgaccaaacccttcaaagttatggt
ttgcaagctgatcataccatccacatggttcgtagttttaccccatcttcatctatacct
cctcctgcagctaccacaaatactgcaactcctaattctactccaggggtcacacggggt
gttggttctaatgagggtgctggtctgggagcatcatctttccctggacttaatgcactt
ggtggcaatggaggtttgggtttgtttgggtctggacttcctgaatttgagcaagtacag
caacaactaactcaaaatccaaacatgatgagcgaactaatgaatacacctgctattcaa
agtttgatgaataacccagagttaatgcgtagtttgattgtgagcaatccccaaatgcgt
gagattattgatcaaaacccggagcttgggcatatacttaatgatcctagtattcttcag
cagacgttagaagctgcaaggaaccctgagctcatgcgtgaaatgatgcggaacactgac
agggctatgagtaatattgaatcctctcccgagggttttaacatgcttaggcgtatgtat
gaaaatgttcaggaaccatttatgaatgctacaactatggctggaaataatggaaatagt
ccgagctcaaacccatttgctgctctattgagcaatctaggtgattctcaagctaggagc
ttacctaacaacacttctacaaatggttctgaaaccactcatggacaaacttccccaaac
acaaatcctcttcctaatccttggggaaacactgttggtggcgggggcgcccagaccaat
gctactgcaaggtcaaatcctgctggagatgctagggcaccaggtcttggtggtctggga
ggccttggacttccggatgtaccacccatgatgaatggaatgccagatgcttctcagttg
actcaattgttgcaaaatcctgctctatcacagatgatgcagagcatagtgtctaatccc
caatatatgaatcagattatgaatctcaacccgcaactacgcggaatgtttgatttgaat
cctcaattgagagaaatgatgcaaaacccagaagtacttcgtcagatgttttcacccgag
acaatgcagcaaatgctaggtttacagcaatcacttctatcccagctcaatcaacagcaa
tctacctgggattcatcagagactggtgctactacaggagctccaggtgctgctggtctg
gagtcgttgatgaatatgtttggtggtctaggtgctggaagcctgagtgttcccaaccaa
cctgacgttcccccagaagaactctacgccacacaattatcacaattacaagaaatgggt
ttttacgatacggtagagaatatcagagcactacgtgctactgctggaaatgtccatgcg
gcagttgagagacttctaggtaacccggggcagtaa
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