Gossypium hirsutum (upland cotton): 107922310
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Entry
107922310 CDS
T04793
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107922310
Membrane trafficking [BR:
ghi04131
]
Protein recycling
Others
Retriever complex
107922310
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Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
107922310
NCBI-ProteinID:
XP_016707778
UniProt:
A0A1U8L367
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Position
D01:complement(10732989..10743237)
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AA seq
928 aa
AA seq
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MEFRPRNYVAEEQSHSLPRSRADIHPFSSSSPQPILRQVDDNEENRNNEEFFDPLRAPDS
KASVETVDGHDFESSSNGNDDSFPVQTKEWTSFKRFLMQRFPVSKMISVSSTFFFSQMSN
TIVRSGKAHEKSSSSTHLEELDDPQKFSEMDTKVITQQEYVSRLHELKDEINRAWHSEDR
VKSLKLSIKVSRLLMDTSVSNFYPTLFVLVTDVLNMLGDMVWERIRQKAEFAEDGARLCS
LRAENFRASDVPIDAKETCYNWFCKVGSIRELLPRIYLELAIFPCWRFLIEQPAESLQRL
VMMTRGIGDPLASAYCRLYIAHHAQKLPSHDTGYLITCLNDITLIFTRISSTKESAHGCF
ADSKRSLISLMEPSVEFIMKCILNDASQRRAGKVLVELGLGRSQEELFGGSPCVSIVLHH
LLKELPIDIVSFHAVDILHLIKCSNDNSYDQCLNYRLVGLRLSEQISQIGSVEAVVNEVI
QVVSEYGLDEYLKVVDAYLDIVLQNQMDDHLKTILEGISKLASDKVLAEDELASLQSILV
KLLSHFKDLEHVFSLNHFLQILDMMHGNSRGIVNMHILDMATRNGYVHDPTTIQLLFEIS
QALHSDTDLVNMKNDDNQQQARLISRFVRMVDHGVEYERHLAFLMECRGALGSIIELKEI
LVHSSNCLATKALKDGKKHTAFVKTCIAFSEITIPSIPGHIKQLNLYLGTAEVALLGGLV
SHSDGLIDSAINCLQSSDWMEGSRTLDSDGMLSSIRKLCSLLIMVPGNPEVGILHIPKSI
LLIIHSRSWSPRLKARILCAIISLSATLSQERLPYHADHPEIMGNDLLFFGDSSYVRELL
SLTESVLQNLVDVIEQEPSRAARGSLSLEACNCIASSFKINEHVLSVCLKLIETAKLCLN
AKDKYLTSTISFLDKNLPAAAVSSSIAI
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggagttcagacctcgaaactacgtcgcagaagagcagtcccactcgcttcctcgatca
cgcgccgatatccaccctttctcttcctcctctcctcagcctatcctccgccaggttgat
gataacgaggaaaatagaaacaacgaggagttctttgatccgcttagagcacctgattct
aaggcatcggttgaaactgtcgacggacacgattttgagagtagttctaatggaaacgac
gattctttcccagttcaaacaaaggagtggacctcttttaagagattcttaatgcagaga
tttcctgtttccaaaatgatttcagtttcttctacattcttcttctcacagatgtccaat
acaatagtgagaagtggaaaagcacatgagaaatcttcaagtagcacacatctggaagaa
ctggatgatccacaaaaattttcagagatggataccaaggttatcactcagcaggaatat
gtatcacgattacatgaactgaaagatgaaataaatcgtgcttggcacagtgaagatcgt
gtaaaatctttgaagttatctataaaggtttcaaggcttctaatggatacatcagtttca
aatttttatccaacattgtttgtcctagttacggatgtactgaacatgcttggggacatg
gtatgggaacgcattaggcagaaagctgaatttgctgaagatggagccagactttgctcc
ttgagagcagagaattttagagcaagtgatgttcctattgatgccaaggaaacttgctat
aactggttttgcaaggttggctccattcgagaacttcttccacgaatttatttggagctg
gctatcttcccttgttggcgttttctgattgaacaaccagcagagtctcttcagcgcctc
gtcatgatgactagagggataggagatccgttagcatctgcctattgtcgcctgtatatt
gcccatcatgcacagaagttgccctcacatgatacaggatatctaattacatgtcttaat
gacatcacactcatatttacacggatatcatcaacaaaggaatctgcacatggatgtttc
gctgacagtaagaggtcacttatcagtctgatggaaccatctgttgagtttattatgaaa
tgcatattaaatgatgcatctcagaggcgggcagggaaagtacttgttgagcttggacta
gggagaagtcaggaggaattgtttggtggttccccatgtgtctcaattgtacttcatcat
ttactgaaggaacttcctattgacattgttagctttcatgctgtggatatccttcatctt
attaagtgcagcaatgataactcctatgatcagtgtttgaattataggttggttggactc
aggctgtctgaacagatatctcaaattggcagtgttgaggctgttgtcaatgaagttatt
caggtggtttctgaatatgggcttgatgagtacctgaaggttgtagatgcttatcttgat
attgttcttcaaaatcagatggatgaccatctaaagactattctggaagggatctcaaag
ttggcatctgataaagtgttagctgaagatgaactagcaagtttgcaatccatcttggtg
aagcttctttctcattttaaggacttggaacatgtgttttctttgaatcattttcttcag
atcttagatatgatgcatgggaactctcggggcattgtcaatatgcatatacttgatatg
gctacaaggaatggttatgtacatgatccaacaaccatacagttactctttgaaatatca
caggctttacatagtgatactgatcttgtaaacatgaaaaatgatgataaccaacagcaa
gcacggctgatttctcgttttgtccgaatggtagatcatggagtagagtatgaacgacat
ttagcatttcttatggaatgtcgtggggcccttggtagcattattgaactcaaggaaatt
cttgttcattctagtaattgtttagctacaaaagctctaaaagatgggaaaaagcatact
gcttttgtaaagacttgcatagcatttagtgaaatcacaattccttctattccgggtcac
attaagcaattaaatctttatcttggaactgctgaggttgcactgttaggtggtttagtt
tctcattctgatggactgatagattcagcaatcaactgtttacagagttctgattggatg
gaaggctctcgaacacttgattctgatgggatgctttcctccattcgaaaattatgcagc
ctcttgattatggttccaggtaatcctgaagtaggaattttgcatattccaaagagtata
ttattgatcattcattcccggtcatggtctccaagactgaaggcaagaatattatgcgca
ataatttctttatcagctacactttctcaagaaaggctcccataccatgcagatcatcca
gagattatgggcaatgatttgttattttttggtgattcatcttatgtgcgtgaacttctc
tcattgacggaatctgttcttcaaaaccttgttgacgttattgagcaagagccttcccgg
gctgcccgtggaagcttgtcacttgaagcttgtaactgcatagcatcatctttcaagata
aacgaacatgtattatctgtctgcttgaaactgattgaaactgccaaattgtgtttgaat
gcgaaggacaagtatctcacttccaccattagttttctggacaagaacttgcctgctgca
gctgtctcatcgtctattgctatctga
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