Gossypium hirsutum (upland cotton): 107922334
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Entry
107922334 CDS
T04793
Name
(RefSeq) cyclic nucleotide-gated ion channel 2-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
107922334
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ghi04040
]
107922334
Ion channels [BR:
ghi04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
107922334
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Motif
Pfam:
Ion_trans
cNMP_binding
TMEMspv1-c74-12
IQ
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
107922334
NCBI-ProteinID:
NP_001314129
UniProt:
Q5D6H2
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Position
D09:2718613..2723361
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AA seq
715 aa
AA seq
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MPSQSNFSLSRWFGLFQLPNSMPERSDNGSVSGEGNEENPISYTVECYACTQVGVPVFHS
TSCDQAHPPEWEASAGSSLVPIQARTASKQKKTQQPAAPNTRRPSGPFGRVLDPRTKRVQ
NWNRAFLLARAMALAIDPLFFYALSIGRGGSPCLYMDGGLAAIVTVLRTCVDAVHLFHLW
LQFRLAYVSRESLVVGCGKLVWDARAIASHYVRSLKGFWFDVFVILPVPQAVFWLVVPKL
IREEQIKIIMTILLLIFLFQFLPKVYHIICLMRRLQKVTGYIFGTIWWGFGLNLIAYFIA
SHVAGGCWYVLAIQRVASCLRQQCARNKQCKLSLSCSEEVCYQFLFPAEAVGNTCGGNST
NVIGKPLCLEVHGPFNYGIYQWALPVVSSNSVAVRILYPIYWGLMSLSTFGNDLEPTSHW
LEVMFSICIVLAGLMLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMKRRQLPSCLRQ
RVRHYERQKWATLGGEDEMELIKDLPEGLRRDIKRFLCLDLIKKVPLFHNLNDLILDNIC
DRVKPLVFSKDEKIIREGDPVQRMVFVVRGRIKRIQSLSKGVVATSLIESGGFLGDELLS
WCLRRPFINRLPASSATFVCVEPIEAFSLDSNHLKYITDHFRYKFANERLKRTARYYSSN
WRTWAAVNIQLGWRRYRTRTRGPMISAAENGNSSDRRLLQYAAMFMSIRPQDHLE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcagtccaacttctccctatcaaggtggtttggactttttcaacttccaaac
tcaatgccagagagatctgataatggtagtgttagcggcgaaggcaatgaagaaaaccca
atttcctacaccgtagaatgttacgcttgtactcaagtcggtgttccagtttttcactcc
accagctgtgaccaagctcacccaccggaatgggaagcctccgctggttcttccctcgtt
ccaattcaagctcgtacggcctccaaacagaagaagactcaacagcctgccgcgcctaat
actcggcgaccttctggtccgttcggtcgggtgcttgatcctaggaccaagcgagtgcaa
aactggaaccgggctttcttattggctcgtgcaatggctttagccattgatcctttgttt
ttctatgctttatctataggaagaggtgggtcgccgtgtttgtacatggatgggggcctc
gctgccatcgtaaccgtcctccgcacgtgtgtggacgccgtgcatttgttccatctttgg
cttcagttcagactggcgtacgtgtcaagggagtcgctggtcgtcggttgtggtaaactc
gtgtgggacgcacgtgccatcgcttctcattacgttcgttccctcaaaggtttctggttt
gatgtctttgtgattctgccggttcctcaggcagtattttggttagttgtaccaaaatta
ataagggaagagcagatcaagattattatgacaatactgttattaatcttcttgttccaa
ttcttgccaaaggtttaccacatcatttgcttaatgagaaggctgcaaaaggtcaccggt
tacatctttggcaccatttggtggggttttggccttaatctcattgcctacttcatagcc
tctcacgttgctggagggtgctggtatgtccttgcaatacaacgggtagcctcatgtctg
cggcaacaatgcgcgagaaacaagcagtgcaagctttcattgtcgtgctcggaggaagtg
tgctaccaattcttatttccagctgaggcagtaggaaatacttgtggtggtaactcaacc
aacgttattggaaaacctttatgtttagaggttcatggaccattcaattatgggatatat
cagtgggctctccctgttgtttctagcaattctgttgctgttaggatcctttatcccatc
tattggggcttaatgtctctcagcacctttgggaatgatcttgaaccaacaagtcactgg
ttagaagtgatgttcagtatttgcattgtgcttgctggattgatgctctttactttattg
attggaaacattcaggtattcttgcatgctgtcatggcgaagaagaggaaaatgcagctg
agatgtcgagacatggaatggtggatgaaacgccggcaactaccatcttgtttgagacaa
cgagtccgccattacgaacgccaaaaatgggcgaccttgggcggagaagacgaaatggaa
ctgatcaaagacttacccgaaggcctccggagagacattaaacgcttcctttgccttgac
ctcatcaagaaggttcctttattccataacttgaatgatcttattctggataacatctgt
gatcgagttaagccgctcgtattctctaaagatgaaaagataattagagaaggtgatcca
gtacaaagaatggtgtttgtcgttcgtggacgtataaaacgtatccaaagccttagcaaa
ggcgtggttgccacaagtttaatcgagtcaggaggcttcctaggtgacgaattgttgtca
tggtgtcttcgccgaccatttatcaaccgtcttccagcctcgtccgcaacatttgtttgt
gtagagccgattgaagcattcagtctcgactcaaaccatctcaaatacattacagatcac
ttcaggtataaatttgccaatgagagacttaaaagaacagcaagatactattcatcgaat
tggcgaacatgggcagccgtgaatatacaacttggctggcggcgttacagaacgaggact
cgaggtccaatgatttctgctgccgaaaacggcaacagcagcgaccgccggttgctgcaa
tacgctgccatgtttatgtcaataaggccacaagatcatctagaataa
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