Gossypium hirsutum (upland cotton): 107922395
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Entry
107922395 CDS
T04793
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00900
Terpenoid backbone biosynthesis
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Module
ghi_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
107922395
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ghi01006
]
107922395
Enzymes [BR:
ghi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
107922395
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
107922395
2.5.1.29 geranylgeranyl diphosphate synthase
107922395
Prenyltransferases [BR:
ghi01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
107922395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
107922395
NCBI-ProteinID:
XP_016707903
UniProt:
A0A1U8L3J7
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Position
D01:complement(56209587..56211781)
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AA seq
339 aa
AA seq
DB search
MVFSTVLTSVPNLYLTRKPKNIHIQIRCLSSPSVSISSQSNLTQFDLKAYWATLYAEITQ
KLEEAIPVKYPDQIYEAMRYSVLAKGAKRAPPVMCVAAYEIFGDNRLAAFPTACALEMVH
AASLIHDDLPCMDDALERRGQPSNHKVFGDDMAILAGDALFPLGFHHIVMHTPPELVPES
RLLRVIAEIARTVGSSGMAAGQFLDLKGGNTVDFIQEKKYGAMGECSAVCGGLLAGAKDD
EIERLRRYGRAVGVLYEVVNDVLLSKSTEKEGTEGQEKKGKGYVRLYGIEKSMEIMEELR
SKAKNELDGFEKYGDCVAPLYSFIDYAINRGFNVSDLSQ
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggttttctcaacggtgttaacatcagttccaaatctctaccttaccaggaaacccaag
aatattcacatccaaattcgatgcctatcgtcaccatctgtatcaatttcaagtcaatca
aatttgacccaattcgatttaaaggcttactgggctaccctttatgcagaaatcactcaa
aagcttgaagaagcaatcccagtgaaatacccagatcagatctatgaagctatgaggtac
tctgttcttgcaaagggtgctaagcgagcccctcctgttatgtgtgtggctgcctatgaa
atctttggggataatcgactcgctgcttttcctactgcttgtgctcttgaaatggttcat
gctgcttcactaattcatgatgaccttccttgcatggatgatgctctagaacgcagaggc
caaccttcgaaccataaggtctttggtgatgacatggcaatccttgctggtgatgcactc
ttccctcttggcttccaccatattgtcatgcatacgcctcctgagcttgttcctgaatcc
cggctcttgcgtgtgattgctgagatagcacgcactgtggggtcttctggcatggctgct
gggcagttcctagaccttaaaggcggcaacactgttgattttatccaagagaaaaaatac
ggtgcaatgggtgaatgctctgcggtgtgtgggggattgttggctggtgccaaagatgac
gagatagaaaggttgaggaggtacgggagagctgtgggtgtattgtatgaagtggtgaat
gatgttttgctgtcaaaatcgacagaaaaagaaggaaccgaggggcaggaaaagaaaggt
aaaggttatgtgaggttgtatgggatcgagaagtcgatggagattatggaagagcttcga
agcaaggctaagaacgaattggatggctttgaaaagtatggtgactgtgtggcgccactc
tatagcttcatagattatgctattaatagaggtttcaatgttagtgacttgagtcaatga
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