Gossypium hirsutum (upland cotton): 107922470
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Entry
107922470 CDS
T04793
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107922470
Enzymes [BR:
ghi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
107922470
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
107922470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
FtsJ
Serglycin
Motif
Other DBs
NCBI-GeneID:
107922470
NCBI-ProteinID:
XP_016708008
UniProt:
A0A1U8L3T4
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Position
D01:complement(12379571..12384976)
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AA seq
641 aa
AA seq
DB search
MAANKNKGAKSKHPPLKKKQRNHLFTEKKRPTKKDEVFDDVSDGQSEEEQLEEAEDLLDG
DEQVSDFDDASDISDDDDAPLADDFLKGSDDEDEDRGSGSTSGSGSDSDGTDIEEKSRAI
DEQREREEEDAQAEMQLNIKEESDEFRLPTKEELEAEQQRPPDLANLQMRIKDIVRVLSK
FKELRQEGNTRKDYVDQLKMDLGSYYGYNEFLIGVLVDMFPVVELMELIEAFEKPRPTCI
RANTLRTRRRDLADTLSKRGVELDQLSKWSKVGLVVYNSHVPIGATPEYLAGFYYIQGAS
SFLPVMALAPQEKERVVDMAAAPGGKTTYVAALMKNSGLIFANEMKETRLKSLTANLHRM
GVANTIVCNYDGRELPKVLGQNSVDRVLLDAPCSGTGVITKDPSVKTSKSLDDIQKCAHL
QKQLILAAIDMVDANSKTGGYIVYSTCSMMVPENEAVIDYALKKRDVKVVPCGLDFGCPG
YIRFREHRFHTSLENTRRFYPHVHNMDGFFVAKLKKMSNTKKNLVSSDGSETVEQTQRPE
EIHSDEDNKKEIEQQKIKKQSPKGKKKSLKAKGLSGNGKVESPPTLKNRDRSENGKVELA
ATSKKRKRKFPSKEEISKAREEKRKAMRGQKKQPKEDKTGI
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaataagaacaaaggagcaaaatcgaagcacccgcctctaaaaaaaaagcaa
agaaaccatcttttcactgagaaaaaacgacccaccaaaaaagatgaggtctttgatgat
gtttctgatggccagagcgaagaagaacaattagaagaagcagaagacttattggatggg
gatgaacaagtgtctgattttgatgatgcctctgatatttcagatgatgatgatgctccc
ttggctgatgatttccttaaaggaagtgatgatgaagatgaagacagaggttctggttct
acatcaggttctggttccgattcagatggaactgatattgaggagaagtcaagggctatt
gatgaacaaagggagagggaagaagaagatgcacaagcagaaatgcagttgaacattaaa
gaagagtctgatgagtttagattgccaacaaaagaggaactggaagcagagcaacaacgt
ccacctgatcttgcaaatcttcagatgagaataaaagatattgttcgagtgctctcaaaa
tttaaggaattgaggcaagagggaaacacaaggaaggattatgttgaccaacttaaaatg
gatttgggttcatactatggctacaatgaattcctcataggggttttggtggatatgttt
ccagttgtggaactcatggaacttattgaagcttttgaaaagcctcgacctacatgtatc
agggcaaacactttaaggactcgcaggagggatctagctgatactctctccaaaagagga
gtagaactagaccaattaagcaagtggtcaaaagtcggattggtggtgtataattcacat
gtgcctattggtgccactccagagtatttggctggcttttactatatacaaggtgcaagc
tcctttttgcctgttatggctcttgctcctcaggaaaaggaacgagtagttgatatggca
gctgcacctggtggtaaaacaacttatgttgctgctctcatgaaaaatagtgggttaatt
tttgcaaatgaaatgaaggaaacaaggctgaagtcacttactgcaaatttgcatcgcatg
ggagtggcaaacacaatagtttgtaactatgatgggagggagcttcccaaggttttgggt
cagaattcggttgatagagtgttgttggatgccccttgtagtggtacaggagttataacc
aaagatccatccgttaaaacctctaaaagtttagatgacatacaaaaatgtgcccatttg
cagaagcaattgatacttgctgctattgatatggttgatgcaaattccaaaactggcgga
tacatcgtttactcaacatgctccatgatggttccagagaatgaagctgtcattgactat
gcactcaagaagagagatgtcaaagtagttccatgtggactcgactttgggtgtccagga
tatatccgatttagggagcatcggtttcatacatccttagaaaacacaaggcggttttat
cctcatgtacataatatggacggcttttttgtggcaaagttgaagaaaatgagcaataca
aagaagaatcttgtaagttctgatggttcagaaacagtagagcaaactcagaggccagag
gagatccatagtgatgaggacaacaaaaaagagattgaacaacaaaagattaagaaacaa
agcccgaaagggaaaaagaagagcttaaaggcgaaagggttatctggaaacggaaaggtt
gaatcaccaccaacattgaaaaaccgggacagaagcgaaaatgggaaggtagaattggca
gcgacatcgaaaaagaggaaaagaaaatttccttctaaagaggaaatctcaaaagcaagg
gaagagaagagaaaggcaatgagggggcaaaagaagcaaccaaaggaagacaagactgga
atatga
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