Gossypium hirsutum (upland cotton): 107922502
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Entry
107922502 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like 5
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ghi03032
]
107922502
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107922502
Enzymes [BR:
ghi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107922502
DNA replication proteins [BR:
ghi03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
107922502
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
107922502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
107922502
NCBI-ProteinID:
XP_016708062
UniProt:
A0A1U8L0C4
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All DBs
Position
D01:53237496..53244922
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AA seq
945 aa
AA seq
DB search
MDADSDSDGSHISATPPRDXTPAPRLPPQPPPKPPTSYKSTASTKRSSHLDIIFKLKKPS
SSKHDKIEPVPEPEPKVKPIQQPDLPSPVGNFPFQIRRPSDQPHPISIGRSLETLPAGFF
STRRASFSKICKPSLNFEPETLPEITAEPKINGSDGPGSTKTCNKKLPNLIRGDVPLPPV
KLQKRSEEGNFVRLNFNGYKRKFTAKGKKMNSYSYKSKYFKRSKRRVKSEVDTGSLCDEE
GLVSEIKLQSKAEKPSRCESVEAAISAVRNEVSDENLVRLLKALYGYDLFRDGQLEAIKM
ILAGKSTMLVLPTGAGKSLCYQIPAVVLPGITLVVSPLVALMIDQLKQLPRMIQGGLLSS
SQGPEEAAETLRMVQEGSIKVLFVSPERFLNADFLSIFSTLTSVSLVVVDEAHCVSEWSH
NFRPSYMRLRASLLRAKLNVECILAMTATATTTTLQSIMSALEISSTNLIQKSQVRDNLR
LSVSLSSNRMKDMLKLMKSSPFLGAQSIIVYCKFQSMYSSQAISNFYLHWILQSETDVIS
RYLCDNNISAKSYHSGMLARDRSRIQELFCANKIRVVVATVAFGMGIDKRDVGAVIHYSL
PESLEEYVQEIGRGGRDGRLSYCHLFFDDVTYYKLRSLMHSDGVDEFAVNKFLCQVFADD
TSSHRKVCSLVKESASRKFDMKEEVMLTLLTHLELGETQYLHLLPQLNVTCTLNFHKTSP
MLLADKDTAVAAILKKSEIKQGQYVFDIPTVANSIGVAPGDLSNHLQNLKAKGEITYELK
DPAYCYKIVKVPSDFCSLTELLTRWLLDIENCKVWKLDAMYSSAVFVVDTCEKTHDCNVA
QQTTCLQERILDYFKGDNNLDVLDKMGQNSPFLRADIKVFLQSNSNVKFTPRAIARIMHG
IGSPAYPSSTWSRTHFWGRYIQIDFKAVMNAAKAELMNFVGKDAP
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgattcagactccgacggatcacatatatcagccactcctccacgagacncc
actcccgccccgaggctgccaccgcaaccgcctccaaaacctcctacctcctacaaatct
accgcaagtaccaaacgctcctctcatttggatatcattttcaaactcaaaaagccatct
tcgtcgaaacacgataaaatcgaacccgtacctgaacctgaacccaaagtcaaacccatt
cagcaaccggacctaccttctccagtcggcaattttcccttccagattcgccgtccgtcg
gatcaaccccatccaatctccattggccgttcccttgaaaccctccccgccggcttcttc
tccacgcgtcgcgcctccttctccaaaatttgtaaaccttccctcaatttcgaacccgaa
accttaccagaaataaccgccgaacctaaaattaatggctctgacggcccgggttctacc
aaaacttgtaacaagaagcttcctaatttgatcagaggagatgtccctttacctccagtt
aaattacaaaagcgcagcgaagaaggtaacttcgtgaggctcaatttcaatggctataaa
cgcaagttcacagccaaaggtaaaaagatgaatagttactcttacaaatcaaagtacttc
aaaagaagcaagagaagagtcaaatccgaagtcgatacgggaagcctttgcgacgaagaa
ggtttagtgtcggaaatcaagttgcagtcgaaagcagagaaaccgagtaggtgcgagtca
gttgaagcggcgatttcggcggttcgaaacgaggtgtcggatgagaacctggtgaggttg
ttgaaagctctgtatggctacgatttgttccgtgatggacagttggaagcgatcaagatg
attcttgctggcaaatcaacgatgctagttttgccaacaggagctgggaagtcgctttgc
tatcagattccggcagtggttttgccggggattacgttggtggtgagtccattggtggct
ttgatgattgatcaattgaaacagttgccccgtatgattcaaggcggtctcttgtctagc
agtcagggacctgaagaggctgctgagacactgaggatggttcaagaagggagcataaaa
gtgctctttgtttcaccagaaaggtttttgaatgcagactttttgtcaatattttctact
cttacctctgtatcacttgtagtggttgatgaagctcactgtgtatctgaatggtcgcat
aatttccggccctcatacatgcggcttagggcatctttacttcgtgccaaactcaatgtt
gaatgcattcttgcaatgactgcaactgccacaaccacaactttgcagtctatcatgtca
gctctagagatttcttcaacaaatctcattcaaaagtcacaagttagggataatctacgg
ttatcagtgtctttgagcagcaatagaatgaaggatatgctaaagttgatgaagtcctct
ccttttttgggagctcaaagcattattgtttactgcaaatttcagtccatgtatagttct
caggccattagtaatttctacttgcactggattttgcagtctgaaactgatgtaataagc
aggtacttatgtgataacaatatctctgcaaagagttaccatagtggtatgctggcaagg
gatcgtagccgcatacaggagctattttgtgccaacaagattagagtggttgttgcaact
gtggcatttggcatggggattgacaagagggatgttggcgctgtaattcattatagcttg
ccagaaagcttagaagagtatgtccaggagattggtcgtggtggacgagatgggagattg
tcctattgccatctattttttgatgacgtcacatattacaagctccgtagtcttatgcac
agtgatggagtggatgaatttgctgtaaacaaattcctttgtcaagtttttgctgatgac
acaagttcacataggaaagtttgttccctggtcaaagaatcagcatctcgcaaatttgat
atgaaagaagaggtaatgctcacacttctaacacatctggagttgggtgaaacacaatac
ctgcatctgcttccacagctaaatgttacttgtactctgaatttccataagacttccccg
atgttacttgctgacaaggatactgcagttgcagccattttgaagaagtcagaaattaag
caagggcagtatgtgttcgatataccaactgtggcaaatagcattggggttgcacctggt
gatctatcaaatcacttgcagaatcttaaggcaaagggagaaataacatatgagttgaag
gatccagcctactgctataagattgtaaaggttcctagtgatttctgttctctcacggaa
cttcttaccagatggttactggatattgaaaattgcaaggtatggaaattggatgccatg
tacagttctgcagtttttgtagtggatacatgtgagaagacacatgattgcaatgttgct
cagcagacaacatgcttgcaagagagaattttggattattttaagggggacaataacctt
gacgtccttgataagatgggtcagaacagcccttttcttcgagcagatataaaggtcttt
ctgcagagcaactcaaatgtcaagtttactccaagagctattgcaaggataatgcatgga
attggaagcccagcatatccttcttcaacttggtcaagaactcatttctggggaaggtat
atacaaatagatttcaaggcggtaatgaatgcagcaaaggcagaactcatgaattttgtt
gggaaagatgcaccttag
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