Gossypium hirsutum (upland cotton): 107922579
Help
Entry
107922579 CDS
T04793
Name
(RefSeq) THO complex subunit 4D
KO
K12881
THO complex subunit 4
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03013
Nucleocytoplasmic transport
ghi03015
mRNA surveillance pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107922579
09122 Translation
03013 Nucleocytoplasmic transport
107922579
03015 mRNA surveillance pathway
107922579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107922579
03041 Spliceosome [BR:
ghi03041
]
107922579
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107922579
TREX complex
107922579
Spliceosome [BR:
ghi03041
]
Complex C
Other components
EJC/TREX
107922579
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107922579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
107922579
NCBI-ProteinID:
XP_016708158
UniProt:
A0A1U8L465
LinkDB
All DBs
Position
D01:15063506..15069300
Genome browser
AA seq
251 aa
AA seq
DB search
MPTPLDDMVNRNNTERGRPRLRPPRPGRMTLATRRGPLAVNARPSQHSITKSSHKTRSLP
WQHDLFEDSLRAAGISGVEVGTKLYVSNLDHGVTNEDIRELFSEIGELKRYSVHYDKNGR
SSGSAEVVYLRRSDAFAALKRYNNVLLDGKPMIIEIVGANAEVPVSARINVTGTKGRKKR
TVVMTSGAGQSRSSAGINRGPNRRGGMTMRSGRGGGRGRGRGRGKRKPMEKSADDLDKEL
ENYHAEAMNVS
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgcctacccctctggatgatatggtaaatcgaaataataccgagagaggcagaccccgc
cttaggccgccgcgccctggaagaatgactctcgctactcgtcgaggccccctcgctgtt
aatgcccgcccatcccaacattctattactaagtcttcccacaaaaccaggagcttgcca
tggcagcatgatttgtttgaagacagccttagagctgcagggatatcaggagtagaggtt
ggcaccaagttatatgtttccaacttggatcatggagtcacaaatgaagatatcagggaa
cttttctctgagattggagagctgaaaaggtactcggttcattacgataaaaatggtcgg
tcaagtggttcagctgaagttgtttatcttagaagaagtgatgcatttgctgctcttaag
cggtacaacaatgtattgttggatggaaagcccatgataattgaaattgttggcgccaat
gcagaagtccctgtttcagctcgcattaatgtaactggaacaaagggaaggaagaagagg
actgttgttatgacgtctggagcaggtcaatcaagaagctctgctggaattaatcgtggt
cctaaccgtcgtgggggtatgactatgaggagtggccgtggaggtggtcgtggtagaggc
cgtggccgtggaaaaaggaagcctatggaaaagtcagcagatgatcttgacaaggagctt
gagaactatcatgctgaggccatgaacgtttcctga
DBGET
integrated database retrieval system