KEGG   Gossypium hirsutum (upland cotton): 107922579
Entry
107922579         CDS       T04793                                 
Name
(RefSeq) THO complex subunit 4D
  KO
K12881  THO complex subunit 4
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03013  Nucleocytoplasmic transport
ghi03015  mRNA surveillance pathway
ghi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107922579
  09122 Translation
   03013 Nucleocytoplasmic transport
    107922579
   03015 mRNA surveillance pathway
    107922579
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107922579
   03041 Spliceosome [BR:ghi03041]
    107922579
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     107922579
    TREX complex
     107922579
Spliceosome [BR:ghi03041]
 Complex C
  Other components
   EJC/TREX
    107922579
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    107922579
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 107922579
NCBI-ProteinID: XP_016708158
UniProt: A0A1U8L465
LinkDB
Position
D01:15063506..15069300
AA seq 251 aa
MPTPLDDMVNRNNTERGRPRLRPPRPGRMTLATRRGPLAVNARPSQHSITKSSHKTRSLP
WQHDLFEDSLRAAGISGVEVGTKLYVSNLDHGVTNEDIRELFSEIGELKRYSVHYDKNGR
SSGSAEVVYLRRSDAFAALKRYNNVLLDGKPMIIEIVGANAEVPVSARINVTGTKGRKKR
TVVMTSGAGQSRSSAGINRGPNRRGGMTMRSGRGGGRGRGRGRGKRKPMEKSADDLDKEL
ENYHAEAMNVS
NT seq 756 nt   +upstreamnt  +downstreamnt
atgcctacccctctggatgatatggtaaatcgaaataataccgagagaggcagaccccgc
cttaggccgccgcgccctggaagaatgactctcgctactcgtcgaggccccctcgctgtt
aatgcccgcccatcccaacattctattactaagtcttcccacaaaaccaggagcttgcca
tggcagcatgatttgtttgaagacagccttagagctgcagggatatcaggagtagaggtt
ggcaccaagttatatgtttccaacttggatcatggagtcacaaatgaagatatcagggaa
cttttctctgagattggagagctgaaaaggtactcggttcattacgataaaaatggtcgg
tcaagtggttcagctgaagttgtttatcttagaagaagtgatgcatttgctgctcttaag
cggtacaacaatgtattgttggatggaaagcccatgataattgaaattgttggcgccaat
gcagaagtccctgtttcagctcgcattaatgtaactggaacaaagggaaggaagaagagg
actgttgttatgacgtctggagcaggtcaatcaagaagctctgctggaattaatcgtggt
cctaaccgtcgtgggggtatgactatgaggagtggccgtggaggtggtcgtggtagaggc
cgtggccgtggaaaaaggaagcctatggaaaagtcagcagatgatcttgacaaggagctt
gagaactatcatgctgaggccatgaacgtttcctga

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