KEGG   Gossypium hirsutum (upland cotton): 107922614
Entry
107922614         CDS       T04793                                 
Name
(RefSeq) SEC12-like protein 1
  KO
K14003  prolactin regulatory element-binding protein
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107922614
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107922614
Membrane trafficking [BR:ghi04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    107922614
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WD40_WDHD1_1st WD40_Prp19 EIF3I WDR55 WD40_CDC20-Fz Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_CAF1B_HIR1
Other DBs
NCBI-GeneID: 107922614
NCBI-ProteinID: XP_016708214
UniProt: A0A1U8L525
LinkDB
Position
D01:complement(26684271..26689431)
AA seq 471 aa
MLVKQARRGFQNTLLWDPPPKIHNRIRFVSLVPLSLCPAPTLLYFLSQRLLLFINFFFNR
SKTQQNFKYLKLKISFISSSMEGEAGGSVSCGSWIRRPENVNWVVLARIMTRPTSSSSSV
IEIFPFDPNTTSLSSSPLARHELEESDGDPITIAVHPSGDCFVCSTTNGGCKLFELYGQE
THLQLSTKELPPLLDAGPQKCLAFSVDGSRFAAGGVDGRLRILEWPTLRIIVDEVRAHKS
FRDMDFSLDSEFLASTSTDGSARIWKTEDGVPLMTLARNSDEKIELCRFSKDGTKPFLFC
TVQRGDKAVTAVYDISTWNKIGHKRLLGKPASVMSVSLDGKYLALGSKDGDICVVEVKKM
EISHWNKRLHLGTSIASLEFCPSQRVVLTTSSQWGAMVTKLNVPADWKEWQIYLLLLGLF
LASAVVFYIFFEKSDSFWNFPIAREQTRRNIDSFLGDAQSDDPNVFGPLDM
NT seq 1416 nt   +upstreamnt  +downstreamnt
atgttggtaaaacaggcgaggcggggcttccaaaataccttgctgtgggatccacccccc
aaaatccacaaccggatacgctttgttagccttgtacctctctcgctttgtcctgctccc
accttactatattttctttcccaaagactcctactttttataaatttcttcttcaaccgt
tccaaaacccagcaaaattttaaatatctaaaactaaaaatatctttcatttcttcttca
atggaaggtgaagcaggtgggtccgtctcgtgtgggtcatggatccgtcgacccgaaaac
gtcaattgggttgtcttggcccggataatgacccgacccacttcttcttcttcttcagtt
attgagattttcccttttgatcccaacaccacttctctctcttcgtctccgttggctagg
catgagcttgaagaaagtgatggtgatccaataaccattgcagtgcacccaagtggagat
tgttttgtttgctctaccactaatggaggctgcaagttgtttgagttgtatggtcaagaa
acacatttacagctgtccaccaaagaattacctcctctcctagatgcgggcccgcaaaaa
tgcctagctttcagtgttgatggttctagatttgctgctggtggggtggatggacggctt
agaatcttggaatggccaactctacgcatcattgtagatgaagtaagagcgcataaatcc
tttcgagatatggattttagcctagattctgagttcttagcttcaacatcaactgatggt
tctgcaagaatatggaagacagaagatggtgttcctttgatgactttagctcgcaactcg
gatgaaaagattgaattatgtcggttctccaaggatgggacaaaaccatttttgttttgc
actgttcaaaggggtgataaagcagttactgcagtttatgacataagcacgtggaataaa
attgggcataaaagattactcggaaagcctgcttctgttatgtctgttagcctggatgga
aaatatcttgctctcggaagcaaagatggagacatctgtgtggttgaagtaaagaagatg
gagatcagccattggaacaagaggctacacttgggtacatccattgcatcactagagttc
tgccctagtcaaagggttgtacttacaacttctagtcagtggggagcaatggtaacaaaa
ctaaacgtccctgccgactggaaagagtggcagatctatttgctgcttttaggactattt
ttggcatcggcagttgtgttttacatattcttcgagaaatcggattcattttggaacttc
cctatcgcgagagaacaaacgagacggaacatagactcgtttttaggggatgcacagtcc
gatgatccaaatgtgtttggaccgcttgatatgtga

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