Gossypium hirsutum (upland cotton): 107922614
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Entry
107922614 CDS
T04793
Name
(RefSeq) SEC12-like protein 1
KO
K14003
prolactin regulatory element-binding protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107922614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107922614
Membrane trafficking [BR:
ghi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
107922614
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_Prp19
EIF3I
WDR55
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
107922614
NCBI-ProteinID:
XP_016708214
UniProt:
A0A1U8L525
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All DBs
Position
D01:complement(26684271..26689431)
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AA seq
471 aa
AA seq
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MLVKQARRGFQNTLLWDPPPKIHNRIRFVSLVPLSLCPAPTLLYFLSQRLLLFINFFFNR
SKTQQNFKYLKLKISFISSSMEGEAGGSVSCGSWIRRPENVNWVVLARIMTRPTSSSSSV
IEIFPFDPNTTSLSSSPLARHELEESDGDPITIAVHPSGDCFVCSTTNGGCKLFELYGQE
THLQLSTKELPPLLDAGPQKCLAFSVDGSRFAAGGVDGRLRILEWPTLRIIVDEVRAHKS
FRDMDFSLDSEFLASTSTDGSARIWKTEDGVPLMTLARNSDEKIELCRFSKDGTKPFLFC
TVQRGDKAVTAVYDISTWNKIGHKRLLGKPASVMSVSLDGKYLALGSKDGDICVVEVKKM
EISHWNKRLHLGTSIASLEFCPSQRVVLTTSSQWGAMVTKLNVPADWKEWQIYLLLLGLF
LASAVVFYIFFEKSDSFWNFPIAREQTRRNIDSFLGDAQSDDPNVFGPLDM
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgttggtaaaacaggcgaggcggggcttccaaaataccttgctgtgggatccacccccc
aaaatccacaaccggatacgctttgttagccttgtacctctctcgctttgtcctgctccc
accttactatattttctttcccaaagactcctactttttataaatttcttcttcaaccgt
tccaaaacccagcaaaattttaaatatctaaaactaaaaatatctttcatttcttcttca
atggaaggtgaagcaggtgggtccgtctcgtgtgggtcatggatccgtcgacccgaaaac
gtcaattgggttgtcttggcccggataatgacccgacccacttcttcttcttcttcagtt
attgagattttcccttttgatcccaacaccacttctctctcttcgtctccgttggctagg
catgagcttgaagaaagtgatggtgatccaataaccattgcagtgcacccaagtggagat
tgttttgtttgctctaccactaatggaggctgcaagttgtttgagttgtatggtcaagaa
acacatttacagctgtccaccaaagaattacctcctctcctagatgcgggcccgcaaaaa
tgcctagctttcagtgttgatggttctagatttgctgctggtggggtggatggacggctt
agaatcttggaatggccaactctacgcatcattgtagatgaagtaagagcgcataaatcc
tttcgagatatggattttagcctagattctgagttcttagcttcaacatcaactgatggt
tctgcaagaatatggaagacagaagatggtgttcctttgatgactttagctcgcaactcg
gatgaaaagattgaattatgtcggttctccaaggatgggacaaaaccatttttgttttgc
actgttcaaaggggtgataaagcagttactgcagtttatgacataagcacgtggaataaa
attgggcataaaagattactcggaaagcctgcttctgttatgtctgttagcctggatgga
aaatatcttgctctcggaagcaaagatggagacatctgtgtggttgaagtaaagaagatg
gagatcagccattggaacaagaggctacacttgggtacatccattgcatcactagagttc
tgccctagtcaaagggttgtacttacaacttctagtcagtggggagcaatggtaacaaaa
ctaaacgtccctgccgactggaaagagtggcagatctatttgctgcttttaggactattt
ttggcatcggcagttgtgttttacatattcttcgagaaatcggattcattttggaacttc
cctatcgcgagagaacaaacgagacggaacatagactcgtttttaggggatgcacagtcc
gatgatccaaatgtgtttggaccgcttgatatgtga
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