Gossypium hirsutum (upland cotton): 107922705
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Entry
107922705 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase ZNF598-like
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107922705
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107922705
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107922705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
RING_ZNF598
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
107922705
NCBI-ProteinID:
XP_016708332
UniProt:
A0A1U8L108
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All DBs
Position
A12:complement(84050467..84054444)
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AA seq
858 aa
AA seq
DB search
MDDSCAVCADNLEWVAYGACGHRDVCSTCVSRLRFICNDRRCCICKTESNVIFVTKALGD
YTRMINDFSVLPSDVREGRVGSYWYHEDTQAFFDDVDHYRMIKAMCRLSCSICDKMDEQS
NDGVKRRGKFRNIEQLKGHLFHKHRLVMCSLCLEGRKVFICEQKLYTRAQLHQHINTGDS
EVDGTESERGGFMGHPMCEFCKTPFYGDNELYSHMSTEHYTCHICQRQHPGQYEYYKNYD
DLEIHFRRDHYLCEDEACLAKKFIVFQSEAELKRHNTIEHGGRMSRAQRSAALQIPTSFR
YRRSNEENRHGRGRTFRREASDNDYQLSMAIEASLGMASDPPASSTAQAVSNHRDTNDID
PLVQPFESLSTTDAESSSRYLQALGTGSRGGPLQESSFPPLPVAPSTSQQKSQHSSGLPN
NNMAAHLRRQKNGNKNALSSAQAWPATSHRTGQASSISSQVRPGANVSAVISLGNGSGNG
NRVAQLGYASSTQAQAHAQAQAQAQAQAQAQAQAQAQAQARPTTADILMSSGSRTSSGSK
SRISHSSSAPNLSDGGYSEPSASDFPPVSAAQGHKQSSSSQVLTNVEDVRMANKSLVEKM
RAALDYDEEKYTAFKEVSGQYRQGLIGTDRYLDYVHQHGLSHLVLELARLLPDVQKQKEL
IDTYHASLQSNGLQENGGGAQGSVLWKEKDASKKGKGKGKSVDTAGSNSKDVLADSILST
VRQLQSSYKPTEEITEVLSKDGYRPSKGKAKVMVEEQQVQLNSSNQPSIRIGGQNESLPV
KAGSGDGGGGSKQRKKTSKFHRVRLGDGSMASLVDLKNSEPDPEPEPLDNKFDGSQNSTG
ALPVRGVWKKGGSKKLFL
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagctgtgcggtttgtgctgacaatttggaatgggttgcctatggcgcctgt
ggtcatcgggacgtctgctccacgtgcgtctctcgtctccgattcatctgcaacgatcgc
cgctgctgcatctgtaaaactgaatccaacgtcatcttcgtcactaaggctttaggggat
tatacgaggatgataaatgacttctctgtattgccatctgatgtaagagaaggacgggtg
ggttcttattggtaccatgaggatacacaggcctttttcgatgatgttgatcactacagg
atgatcaaggcaatgtgcaggctttcgtgcagtatatgtgacaagatggatgagcagtcc
aatgatggggtgaagcggcgagggaagtttaggaacattgaacagctgaaaggtcatttg
tttcataaacatagattggttatgtgcagcctgtgtttggagggtcgaaaggtgtttatt
tgtgaacaaaagctatatactagagcacagttacatcaacatataaacacaggtgactct
gaggtggacggaactgagagtgagagaggtggcttcatggggcatccaatgtgtgaattc
tgcaagaccccgttttatggggataatgaattatattcgcacatgtccacagagcactat
acatgtcatatatgccaaaggcagcatccaggacaatatgaatattacaagaattatgat
gaccttgagattcattttcgccgagatcattacctatgtgaggatgaggcttgccttgcc
aaaaagttcatcgtcttccagtctgaagctgaactaaagagacataataccattgaacat
ggaggtcgcatgtctcgagcacaacgtagtgctgctttacaaattccaacaagctttcgg
tatcgtcgaagtaatgaagaaaatcgccatggaaggggacgaacatttcggcgtgaggct
tctgataatgactatcaactttcaatggccattgaggcaagtttgggaatggccagtgat
cctccagcatcatctacagcacaggcagtctctaatcatagagacacaaatgatattgat
ccgcttgttcagccttttgagtcattatctacaacagatgctgaatcatcttcaagatat
cttcaagctttggggacaggttcaaggggtggacctttgcaagaatcttcttttcctcct
ctccctgtggctcccagcaccagtcaacagaagtcccaacatagctcaggtttaccgaat
aacaacatggcagcgcatctacggagacagaagaatgggaataaaaatgctttgagttca
gctcaagcttggccagcaacaagtcataggactgggcaagcatcaagtatttcaagtcag
gttagaccaggagcaaatgtttcagctgtaatatcgcttggtaatggtagtggtaatggt
aacagggttgcacagttgggctatgcaagctcgactcaggctcaggctcatgctcaggct
caagctcaggctcaagctcaggctcaagctcaagctcaagctcaggctcaggctcaggct
cgacccacaacggcagatatattgatgtcatctggttctcgaacaagctctggcagcaaa
agtaggattagccattcttcatcagctccaaatctcagtgatggtggatactcagaacca
tctgcttctgattttcctcctgtttctgctgcacaagggcacaagcaatcctcaagcagc
caggtgctgacaaatgtggaagatgttcgtatggccaacaaatctttggtggaaaagatg
cgagctgctcttgattatgatgaagaaaaatatactgcttttaaagaagtatctggacag
tatcgtcagggcttaataggcacagacagatatttggattatgtacatcagcatggcttg
tcacatctagttcttgagctggctagactcttgcctgatgttcagaagcagaaagaacta
attgacacctaccatgctagtttacaaagcaatggtctgcaggagaatggtggtggggcc
cagggcagtgtgttgtggaaggagaaggatgcctctaagaaagggaaaggaaaagggaaa
tctgttgatactgctggcagtaattcaaaggatgttctggccgatagtattctcagcact
gtccgccaattgcagtcaagttataagcctactgaagaaattacggaagtgctatcaaag
gatggttaccgtccttccaaaggtaaagcaaaggtgatggtggaggagcagcaggtgcaa
ctcaattcaagcaatcagccatcaataagaattgggggccaaaatgagtccttaccagtg
aaagctggatcaggggatgggggtggtggtagcaagcagcgaaaaaaaacctcaaagttc
caccgagttcggcttggtgatggttcaatggcatcactagtggatctcaaaaattctgag
ccagaccctgaacctgaaccattagataacaagtttgatggtagccaaaactcaactgga
gcactgcctgtacggggggtatggaagaagggaggaagtaaaaagctctttttataa
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