Gossypium hirsutum (upland cotton): 107922787
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Entry
107922787 CDS
T04793
Name
(RefSeq) vesicle transport v-SNARE 13 isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107922787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107922787
Membrane trafficking [BR:
ghi04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
107922787
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
Cytochrome_B
Cauli_AT
Prominin
Fusion_gly
Pox_EPC_I2-L1
EssA
Motif
Other DBs
NCBI-GeneID:
107922787
NCBI-ProteinID:
XP_016708445
UniProt:
A0A1U8L1A6
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All DBs
Position
A11:complement(6929557..6932587)
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AA seq
221 aa
AA seq
DB search
MSEVFEGYERQYCELSANLSKKCTAAAALGGEQKKQKVSDIRVGLENAEDLIRKMDIEAR
SLQPNVKTMLLAKLREYKSDLNNLKSEVKRIASGNINPDARDQLLESGMADALTASTNQR
SRLMMTTERLNQSSDRIRDSRRTMLETEELGVSILQDLHSQRQALLHANNALHGVDDNIG
KSKRILTAMSRRMNRNKWIIGIIIAVLIITIAAVLYFKLVK
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagttttcgaaggatatgaacggcaatattgcgagctatcggcgaatctttcc
aagaagtgtacggcggcggctgcacttggtggagagcagaaaaaacaaaaagtttctgat
ataagagttggattggagaatgcagaagatctgattcggaaaatggacattgaggcaaga
agtttgcagccaaatgtcaagactatgcttcttgctaagttaagggaatataaatcggac
cttaacaatctgaaaagcgaagttaaaagaattgcatctggcaatataaatccagatgct
cgagatcagttgttagagtctggaatggctgatgcactcacggcatcaactaatcaaaga
tcaagactaatgatgactacagagcggttgaatcagagcagtgacagaattagggatagt
agaagaaccatgctcgaaacagaagagcttggtgtttccattcttcaggatttgcattcg
cagcgacaggctctcttgcatgccaataacgcgcttcatggagtggatgacaacattggc
aagagcaagagaattttgacagccatgtcaaggaggatgaaccggaacaagtggatcatt
ggcatcattattgcagttcttatcatcactattgccgctgttttatacttcaaacttgtt
aaatag
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