Gossypium hirsutum (upland cotton): 107922824
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Entry
107922824 CDS
T04793
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00061
Fatty acid biosynthesis
ghi00071
Fatty acid degradation
ghi01100
Metabolic pathways
ghi01212
Fatty acid metabolism
ghi04146
Peroxisome
Module
ghi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
107922824
00071 Fatty acid degradation
107922824
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107922824
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ghi01004
]
107922824
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107922824
Enzymes [BR:
ghi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
107922824
Lipid biosynthesis proteins [BR:
ghi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
107922824
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of breast milk
107922824
Exosomal proteins of breast cancer cells
107922824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-GeneID:
107922824
NCBI-ProteinID:
XP_016708492
UniProt:
A0A1U8L1J8
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Position
A05:24255536..24261851
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AA seq
691 aa
AA seq
DB search
MNGYIVGAIVPIVLVLLRNSRRVKKRGVLVDVGGEPGYTIRNIRFPFPLETAWEGVSTLA
ELFEQSCKQNSNKSLLGTRKLISSEVEVTEDGRSFEKLHYGEYVWLTYAETFAAVCYFAS
GLVQLGHKKGERVAIFADTREEWFIALQACFTRNVTVVTIYASLGEEALCHSLNETDVTT
LICGAKELKKLVNLSGQLDKIKHVICMDDEIPTAASGRWAVTSFADVQRTGYENPVDADL
PIAADVAVIMYTSGSTGLPKGVMLTHGNILATVAAVKTIIPGIGSKDVYLAYLPLAHILE
LAAEHLIVAVGGILGYGSPLTLTDTSSKIKPGTKGDASVLAPTLMAAVPAILDRLRDGIR
KKVDAKGGLSKKLFDLAYSRRLSAINGSWFGAWGLEKYLWDLLIFKKVRAILGGRLRFLL
SGGAPLSPDTQRFINICFGTPIGQGYGLTETCAGGTFSEVDDTSVGRVGAPLPCSFIKLV
DWPEGGYLTSNSPMPRGEILIGGPNVTLGYFKNEEKTKESYRVDERGVRWFCTGDIGQFH
SDGCLEIIDRKKDIVKLQHGEYVSLGKVETALSISPYVDNIMLHADPFHSFCVALVVASQ
QMVEDWASKQGITFTDFADLCEKEETIKEVHSSLAQTAKKSRLEKFEIPAKIKLISSPWT
PESGLVTAALKIKREAIRRAFSEDLAKLYAS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggtatattgttggtgcgattgtccccattgttcttgtgctccttcgaaattca
aggagggtgaagaagcgaggagtgctggttgatgttggtggggaacctgggtacacaatc
cgaaacattcggtttccattccctctagaaacagcatgggaaggtgtatctacacttgca
gaactttttgagcagtcatgtaagcagaacagcaataaaagcttgcttggcactaggaaa
ctgatttcgagtgaggttgaagtaactgaagatggaagatcctttgagaagcttcattat
ggagaatatgtatggttgacatatgctgaaacatttgcagctgtgtgctattttgcttct
ggtttagttcaacttggtcataaaaagggagaacgcgtggcaatctttgctgatacaaga
gaagaatggttcattgcattgcaggcctgctttacgcgcaatgtcactgtggtgacaata
tatgcatctttgggggaggaggctttatgtcactcattaaatgagactgacgttacaaca
ctgatttgcggggccaaagaattaaaaaagcttgtcaaccttagtggacaactcgacaag
ataaaacatgtgatctgtatggatgatgagattccaactgctgcaagtggtagatgggca
gtcacttcttttgctgatgtccagagaaccggctatgaaaaccctgttgatgctgattta
cctattgcagctgatgttgcagttataatgtatactagtggaagtactggattgcctaag
ggtgttatgctgacacatggcaatatactagctaccgttgctgcagtcaagacaattatt
cctggaattggaagcaaagatgtctatcttgcgtatctaccccttgctcatattcttgaa
ttagcggctgagcatttaattgttgctgtaggaggtatcctaggatatggatcccctttg
actcttactgatacatctagcaagataaaaccaggaacaaagggggatgcctccgtgtta
gctccaaccctgatggcagctgttccagcaattcttgatcgtcttcgagatggaatacga
aagaaggttgatgcaaaaggtggactatccaagaaattgtttgacttggcgtattctcgt
agattatctgcaataaatggtagttggtttggtgcctggggccttgaaaagtatctgtgg
gacttactcatctttaagaaggtccgagcaattctaggtggtcgccttcgatttttgctt
tctggaggtgctcctctatcaccagatactcagagatttatcaacatctgctttggtact
ccaattggccaagggtatggtctaactgagacttgtgctggtggcaccttctctgaggtt
gatgatacatctgttggtcgcgttggtgctccacttccttgctcctttattaagttagta
gactggcctgaaggtggatatttaactagtaattcaccaatgcctcgtggagaaatactg
atcggtggcccgaatgtgacgcttggatacttcaaaaatgaagaaaaaacaaaagaatca
tatagggttgatgagagaggagttaggtggttctgtacaggtgacataggacagtttcat
tccgatggttgccttgagataattgaccgtaaaaaagacattgtcaaacttcagcatgga
gaatatgtctctttaggaaaggttgagactgctctcagtatcagtccctatgtcgacaat
attatgttgcatgctgatccatttcacagtttttgtgtggctctcgtggtggcttcccaa
caaatggtggaagattgggcttcaaagcaaggcattacatttactgattttgcagacttg
tgtgagaaagaagaaactatcaaggaagtacattcctctcttgctcagacagccaagaag
tcacgattggagaaatttgagattcctgcaaaaatcaaattgatttctagtccatggact
ccagaatcagggcttgtgactgcagctctcaagatcaagagagaggccattagaagagct
ttttctgaagacctggccaagctatatgcatcatag
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