Gossypium hirsutum (upland cotton): 107922908
Help
Entry
107922908 CDS
T04793
Name
(RefSeq) syntaxin-41 isoform X1
KO
K08489
syntaxin 16
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107922908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107922908
Membrane trafficking [BR:
ghi04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
107922908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Prominin
MCPsignal
Motif
Other DBs
NCBI-GeneID:
107922908
NCBI-ProteinID:
XP_016708605
UniProt:
A0A1U8L1R1
LinkDB
All DBs
Position
A11:complement(12249499..12252060)
Genome browser
AA seq
319 aa
AA seq
DB search
MATRNRTVQYKKTRDAVKSVRAPLSSSASSSGGPVIEMVNASFLRSNRSSYAPLSTEEDP
GPSSGAFTIGLPPSWVDDSEEIAANIQRAKAKMAELAKAHSKALMPSFGDGKEDQRAIEV
LTKEITDLLRKSEKRLRNLSNNGSSEDSTLQKNVQRSLATDLQTLSVELRRKQSTYLKRL
QKQKEDGADLEMNLNDNRYRLDEDDFGGMGFNEHQMSKLKQSEFSTVEREREITQVVQSV
NELAQIMKDISALVIDQGTIVDRIDYNIQNVATSVEEGFKQLQKAERTQKKGGMVMCATV
LVILCFIMIVLLILKELLL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggctaccagaaatcggaccgtccagtacaaaaaaaccagggatgcagtgaagagcgtt
cgagctcctctctcttcctcagcctccagttccggcggtccggttattgaaatggttaat
gcttctttccttcgctccaatcgctcttcctacgctcctctcagcactgaagaagaccct
ggtccttcaagtggcgcgtttacgataggtttaccgccgtcgtgggtcgacgattcggaa
gaaatagcggctaatattcaacgagctaaggccaagatggcggagttagccaaagctcat
tccaaggctttaatgccttcatttggagacggcaaagaagatcaacgcgcgattgaggtt
ttgaccaaagaaattacagatctattaaggaaatctgagaagcgattgcgaaatctttcg
aacaacggatcttccgaggattccactctccaaaaaaacgtacagcgttcgctcgcaaca
gaccttcagaccctatctgtggagctgcggcggaaacaatcaacttatttgaaacggcta
caaaagcaaaaagaggatggtgctgacttggagatgaacttgaatgataacagatatcga
ttggacgaagatgacttcggtggcatgggttttaatgagcaccaaatgagcaagctgaag
cagagtgagttctcaactgtagaaagggagagagagattacgcaggttgtccagtctgta
aatgagcttgctcaaatcatgaaagacatctcagcccttgtgatagaccagggcacaatt
gttgatcgaatagactacaatatccaaaatgttgctacatcagtcgaggagggcttcaaa
cagctccagaaggctgaacgaacacagaagaagggagggatggtgatgtgtgcaacagtg
ctggttattttatgcttcatcatgatagtcctattgatcctaaaagagttattgctatga
DBGET
integrated database retrieval system
