Gossypium hirsutum (upland cotton): 107922968
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Entry
107922968 CDS
T04793
Name
(RefSeq) 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107922968
Enzymes [BR:
ghi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
107922968
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
107922968
Ribosome biogenesis [BR:
ghi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
107922968
23S rRNA modification factors
107922968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_11
CTP-dep_RFKase
Motif
Other DBs
NCBI-GeneID:
107922968
NCBI-ProteinID:
XP_016708657
UniProt:
A0A1U8L223
LinkDB
All DBs
Position
A11:17757456..17760687
Genome browser
AA seq
304 aa
AA seq
DB search
MALHIVKLPFISRCCDSSNSTLFFLSKSYSPLHGRLLKSHLHRSFAVSKSEKLQIPKKKK
RLDELCLERFQQYSRTFIQSWILQGKVCVNGKVVNKAGTTVSDKAVVEIIAEIPKYVCRA
GYKLEAAIEQLSVDVAGKIALDSGLSTGGFTDCLLQYGASYVYGVDVGYGQVADKIRRDE
RVCVIERTNLRYLSGLPKKVDLVTLDLSFISILLVMPAVVNAMKEEATLVTLVKPQFEAR
RSQVGSGGIVRDPKVHQEVLEKIIKGVENFGFQSKGWIESPLKGAEGNTEFLVCFSRISE
KSSE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggcactgcatattgtgaagcttccctttatctcgcgctgctgcgatagcagtaactct
actctgtttttcttatcgaaatcctactctcctcttcatgggagattgctcaaatctcat
ttacatagaagctttgctgtttccaagtcagaaaaacttcaaataccaaaaaagaaaaaa
aggttggatgagttatgtcttgaaaggtttcagcagtacagtcgaacattcatacagtca
tggattttgcaaggcaaagtttgtgtaaatggaaaagtggttaacaaagctggaacaact
gtctctgacaaagctgttgtagaaatcattgctgaaattccaaaatacgtatgtagagca
ggatataagttagaagctgctatagaacagctcagtgttgatgtagctggcaaaatagcg
cttgattctgggttgtccacgggaggattcaccgattgcctgcttcagtatggtgcatct
tatgtttatggggttgatgtaggttatggacaggtagcagacaagattcgtcgagatgaa
cgtgtttgtgtgatagaacggacaaatttaagatatctttccggtctccctaaaaaagtt
gatctggtgacactggacctttcatttatatctattctcttggtcatgcctgctgtagta
aatgcaatgaaggaggaggcaactttagttaccctggttaaacctcagttcgaagctcgt
agatcacaagtaggaagtggtgggatagtgagagatcccaaagttcatcaggaggttctt
gaaaagatcattaagggtgtagagaactttggatttcaaagcaaaggttggattgaatct
cctctaaagggtgctgaaggtaatactgagtttcttgtttgcttcagtcggatttccgag
aaaagttctgaatag
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