Gossypium hirsutum (upland cotton): 107923335
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Entry
107923335 CDS
T04793
Name
(RefSeq) vacuolar protein sorting-associated protein 51 homolog isoform X1
KO
K20296
vacuolar protein sorting-associated protein 51
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107923335
Membrane trafficking [BR:
ghi04131
]
Protein recycling
Others
EARP complex
107923335
Endosome - Golgi transport
Tethering complex
GARP complex
107923335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS51_Exo84_N
Sec5
Dor1
EXOC6_Sec15_N
COG5_N
Vps54_N
COG2_N
VIN3_C
Motif
Other DBs
NCBI-GeneID:
107923335
NCBI-ProteinID:
XP_016709030
UniProt:
A0A1U8L2Z7
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Position
A11:11834948..11841954
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AA seq
792 aa
AA seq
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MLERAKMATDDIPLDDKAKRMRDLLSSFYYPYHGSSPKAHSNYENLDSINSASFNPEHYM
NLLVQKSNLEELLRKHVEMAAEIKNLDTDLQMLVYENYNKFISATDAIKWMKSNIVGMEA
NMEQLLDKIMSVQSRSDRVNTSLFEKREHIEKLHRTRNLLRKVQFIYDLPARLAKCIKSE
AYADAVKFYIGAMPIFKAYGDSSFQDCKRASEDAIIIILKNLQGKLFSDSESIQARAEAA
VLLKQLDFPVDSLQAKLLEKLEQSLGDLQLKTNEIENVLRESNDPSKQGKGFDSVPGIGH
EVSVHGFAEAIRAYRVIFPDSESQLIKLAQNLVIKHFEMTEQRVKRRISSTNFLGALRAI
WDDVLLMDGVLSEAALSNFSLEVAHATVKKYVASTFTYLLQDISDALLKVKVSPKEAAEE
HPLQAALEASKKTVLQGSMDVLLDFRQLLDEKLGLLVKLRAFIIDWVQEGFQDFFRSLDG
CFLLLSGRKNSSSQDQGFSEGALGEKVLAGLVLVLAQLSVFIEQTAIPRISEEIAASFSS
GGARGHEHGHVFISGEICQLFQLGGEKLLHHYINIRTRRVSTLLRKRFTTPNWVKHKEPR
EVHMFVDLFLQELKAVGSEVKQILPEGLLRKHQRSDSNGSTNSSRSNALLDDKMSRSNTQ
KARSQLLETHLAKLFKQKIEIFTKVEYTQESVETTIVKLCLKSLQEYVRLQTFNRSGFQQ
IQLDIHFLRTLLKENIEAEEAIDFLLDEVIVAASERCLDPIPLEPPILDKLVQVKLSKSK
EHNLVKPLDVGR
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaacgagcaaaaatggcgaccgatgatattccattggatgacaaggccaagaga
atgagagatctattgtcaagcttctactatccatatcatggttcatctcccaaagctcat
tcaaattacgaaaacttggattccatcaattccgcatctttcaatcctgagcactacatg
aaccttctcgtacaaaagtcgaatttggaagagcttcttcggaagcatgttgaaatggca
gccgaaatcaagaaccttgatactgatttgcaaatgttggtttatgagaattacaacaag
tttattagtgccacggatgcaattaaatggatgaaaagtaatattgtaggcatggaagca
aatatggagcaacttcttgataagataatgtcagtgcaatctagaagtgatagggtcaac
acttctctttttgagaaaagagaacacattgagaagttgcaccgaacaaggaaccttctg
cgtaaagttcagttcatttatgatctacccgctagacttgcaaagtgcatcaagtcagaa
gcatatgctgatgcagtcaaattctacattggagctatgccaatttttaaggcatatgga
gattcatctttccaggactgtaaacgagcatccgaagatgcaattattataatattaaaa
aacttgcagggaaagctattctcagattctgaatccattcaagctagagctgaagctgca
gtgcttttgaagcaattagattttccggtggatagcttacaggcaaaactccttgaaaag
ttagagcaatctcttggagaccttcaattgaaaacaaatgaaattgagaatgttctacga
gaatctaatgatccttctaaacaaggaaaaggttttgactcggttcctggtataggccat
gaggtctctgtccatggatttgcggaggctattcgtgcttatcgagtaatatttcctgat
tctgaaagtcaattaattaaacttgcacaaaacttggttatcaagcactttgaaatgact
gagcaacgtgtaaagagacgaatttcttctaccaatttccttggtgctcttcgggctata
tgggatgatgtgcttctgatggatggagtcttaagtgaggctgcgctatctaatttttct
ttggaggttgctcatgcaactgttaaaaagtatgttgccagcacatttacttaccttcta
caagacatatcagatgctctcttgaaagtaaaggttagcccaaaagaggcagcagaggaa
catcccttacaggctgctttggaggctagcaaaaaaacagtactccaaggcagcatggat
gtcttactggattttcgccaacttcttgacgaaaagttagggctgctagttaaactgaga
gctttcataattgattgggttcaagaaggatttcaggactttttcaggtctctcgatggt
tgttttctcttgctttctggaagaaagaattcatcaagtcaagatcaaggattttcagaa
ggagcacttggtgaaaaagttcttgctggtcttgtcttggtcctagctcaactttctgta
ttcattgaacaaactgccatcccaagaatttctgaggaaatagctgcctccttctctagt
ggtggtgcacgaggccacgaacatgggcatgtttttatttcgggggagatatgtcaacta
tttcagttaggtggtgaaaagcttttgcatcattacataaatataagaacgcgaagagta
tctactttgctaagaaagaggtttacaacaccaaactgggtcaagcacaaggagcctaga
gaagttcatatgtttgttgatttatttctacaagagttgaaagcagtaggtagtgaggtg
aaacagattttacctgaagggctattgcgtaagcatcaacggtctgacagcaatggaagc
accaactcatcacgtagcaacgcattactagatgataaaatgagtaggtcaaatacccaa
aaagccaggagtcagttattagaaacacatctagcaaaattgtttaagcaaaaaatagaa
atttttacaaaagttgaatatacacaggagtcagttgaaacaactatagtgaaactttgc
cttaaaagtttgcaagaatatgtcagactccaaacctttaatcgaagtggtttccagcaa
attcagctggatattcatttcttaaggactcttttgaaggagaatattgaagctgaagaa
gcgattgactttttacttgacgaggtaattgttgctgcttcagagcgttgtttggaccca
attcctttagagcctccaattctggacaaacttgtacaagtaaagttatcaaaatccaag
gaacataatctagttaaacccctagatgttggtaggtga
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