Gossypium hirsutum (upland cotton): 107923573
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Entry
107923573 CDS
T04793
Name
(RefSeq) ABC transporter B family member 21-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107923573
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107923573
04147 Exosome [BR:
ghi04147
]
107923573
04090 CD molecules [BR:
ghi04090
]
107923573
Enzymes [BR:
ghi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
107923573
Transporters [BR:
ghi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
107923573
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107923573
CD molecules [BR:
ghi04090
]
Proteins
107923573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_29
AAA_16
RsgA_GTPase
Zeta_toxin
AAA_21
AAA_24
DUF87
DEAD
AAA_30
AAA_7
Deam_C
Motif
Other DBs
NCBI-GeneID:
107923573
NCBI-ProteinID:
XP_040936974
LinkDB
All DBs
Position
A11:11006436..11012547
Genome browser
AA seq
1295 aa
AA seq
DB search
MASENGFNGEKVTDLHEAGTSKSQEESQKVPGDNGENQDPESSKGDEKTNTVPFYKLFAF
ADSTDILLMIVGTTAATGNGLSMPLMTILFGNLIDSFGTNQSNGNVVEAVSKVSVRFVYL
AMGAAAAAFLQVSCWMITGERQAARIRGLYLKTILRQDVAFFDVETNTGEVIGRMSGDTV
LIQDAMGEKVGKFSQLISTFIGGFVIAFVKGWLLTLVMLSAIPLLVISGGTIAVIVSKMA
SRGQNAYAKAATVVEQTIGSIRTVASFTGEKQAINNYNKSLVTAYRSGVHEGTAAGVGIG
LVMLVIFCSYALAVWFGGKMILEKGYTGGEVLNVIMAVLTGSMSLGQASPCMTAFAAGQA
AAFKMFETIKRKPEIDSYDTSGKVLEDIRGDVELRDVYFSYPARPEEQVFSGFSLSIPSG
TTVALVGQSGSGKSTAISLIERFYDPQAGEVLIDGINLKEFQLRWIRGKIGLVSQEPVLF
TSSIRDNIAYGKEDATTEEIRAAAELANAANFIDKLPQGLDTMVGEHGTQLSGGQKQRVA
IARAILKDPRILLLDEATSALDAESERVVQEALDRIMGNRTTVIVAHRLSTVRNADSIAV
IHKGKMVEKGSHSELLKDPEGAYSQLIRLQEVNKGLEQLADVSDVNQELFRQSSLRRSFK
RSISRGSSRTSSRNSSFSQPFGLPTEMNVTDPAMLDTEDPAEPPLKQAKEVSILRLAYLN
KPEIPVILIGTLFAAANGVILPLFGILISNMIKTFYQPPDELKKDSRFWALIFLSLGLAS
FLINPARTYFFSIAGCKLIQRIRSTCFEKVVRMEVAWFDEPDNSSGSIGARLSADAASIR
ALVGDALAQLVSSFASALAGLVIAFVASWQMAFIILVLIPLIGVNGYIQAKFMKGFSADA
KMMYEEASQVASDAVGSIRTVASFCAEEKVMQLYKKKCEGPMKTGIRQGLISGSGFGLAF
FFLFSVYATSFYAGAQLVEHGQATFTDVFQVFLALTMAAVGISQSSSFAPDSNKAKIAAA
SIFAIIDRRSKIDPSDESGMTLENVKGNMELRDVSFKYPSRPDIQIFQALSLSIHAGKTV
ALVGESGSGKSTVISLLQRFYDPDSGTITLDGVKIQTLQLKWLRQQMGLVSQEPVLFNDT
IRANIAYGKGGNATEAEIITASELANAHTFISALQQGYDTVVGERGLQLSGGQKQRVAIA
RAIVKSPKILLLDEATSALDAESEKVVQDALDKVMVNRTTVVVAHRLSTIKNADVIAVVK
NGVIVEKGKHDTLINIKDGFYASLVALHMTASTSQ
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgagaatggttttaatggtgagaaagttaccgacttgcatgaagccggtaca
tcgaaaagccaggaagagtcacagaaagtccctggcgataatggagaaaatcaagatcct
gaaagcagcaaaggagatgagaaaactaacacggttccattttacaagctgtttgcattt
gctgattctacggatatcttattaatgatcgtcggcacaaccgctgcaactgggaatggt
ctatctatgccccttatgacaatcctgtttgggaatctcattgattcttttggaacaaac
cagagtaatggcaacgtggttgaagctgtctccaaggtttctgtgagatttgtctacctg
gcgatgggggctgcggcggctgcgtttctccaggtgagttgctggatgatcacaggtgag
agacaagctgcacgaatacggggcctgtacttgaaaaccatattgaggcaagacgttgct
ttctttgatgtggaaacaaacacaggggaagttattggaagaatgtcgggggacacagtt
ctcatacaggacgccatgggcgaaaaggtagggaagttttcacaattgatatccacgttc
attggaggctttgttatagcatttgtcaaaggatggcttcttactctcgtaatgttatct
gctatccctctacttgtaatatctggtggaaccatagccgttatagtatccaagatggca
tcccggggacaaaatgcttatgctaaagctgccactgtagttgaacagacaattggttcg
atccgaactgttgcgtcgtttactggtgagaagcaagcaataaacaattacaataagtca
cttgttactgcttatagatcaggcgttcatgaaggcaccgctgctggagtaggtattggc
ttagttatgctagttatattctgcagttatgctttggctgtctggtttggtgggaagatg
attttggagaaagggtacactggtggtgaagtacttaatgtgatcatggctgtattgaca
ggttccatgtctctggggcaagcatctccatgcatgactgcgtttgcggctggtcaagct
gcagcgtttaagatgtttgagaccatcaaaaggaagccagagattgattcctatgacacg
agtggaaaagtgttggaggatattcgtggggatgtagaactgagggatgtttatttcagt
taccctgccagaccagaggagcaagttttcagtggattctctctttctattccaagtggc
acaacagtagctttggttggacaaagtggaagtgggaaatcaactgcaatcagcctgatc
gagagattttatgatccacaagccggtgaggttcttatcgatggcattaatctcaaggag
ttccagcttagatggataaggggaaagattggtcttgttagccaggaaccagtgttgttt
acgtcaagcataagggataatatcgcatatggtaaagaagatgcaaccacggaagagata
agagcagcagctgaacttgcaaatgctgctaacttcattgataaactacctcagggacta
gataccatggttggagagcatggaactcagctttctggtggacaaaagcagagagtggca
attgcaagagcaatcttgaaagacccacggattttgcttttagacgaagctacaagtgca
ctcgacgcagaatctgaaagagttgttcaagaggcattggacaggataatgggcaatagg
acaactgtcattgttgctcatcgtttaagtactgtgagaaatgcagattcgattgctgta
attcataaaggaaagatggttgaaaaagggtcgcattcagaactactcaaggatcctgag
ggagcttactctcagctcattcgtttacaagaagtaaataaagggttggaacagcttgca
gatgtatcagatgttaatcaagaattgttcagacaatcgagcctaagaaggtcattcaag
cgatcaatcagcaggggatcatctagaactagcagccgcaattcttctttctctcaacct
tttggtttacctactgaaatgaatgtcactgatcctgcaatgttagatacagaagaccct
gctgaaccaccattgaaacaggctaaggaggtttctatcctccggcttgcttacctcaac
aagccggagattcctgtgatcttaattggaactctttttgcagctgccaacggtgtgata
cttccacttttcggtatcctgatttccaatatgatcaaaacattttatcaacctcctgat
gaattgaaaaaggattcaagattctgggcactgatatttttgtcccttggcctggcatca
tttctgataaatcctgctcgaacatacttcttttctatcgccggatgtaaattaatccaa
cgaatcagatcaacatgtttcgagaaagtggtccgcatggaagttgcttggttcgatgaa
cctgataattcaagtggttcaataggtgcaaggctctcggcagacgcagcctcgatacgt
gccctggttggagatgcactagctcagttggtctcaagctttgcatcagcattggctggt
ttagttattgcttttgttgcaagttggcagatggcatttattatcctagtattaatccct
ctcataggggtcaatggatacattcaagcaaaattcatgaagggattcagtgcagatgca
aagatgatgtatgaggaggccagccaagttgccagtgatgcagttgggagtataagaaca
gttgcttccttttgtgcagaggaaaaggtaatgcaactctacaaaaagaaatgtgagggt
ccaatgaaaaccgggataaggcagggtttgattagcggatcaggattcggacttgcgttc
ttctttctgttttctgtttatgcaacaagtttctatgcaggagctcaacttgttgagcac
ggccaggcgacattcacagatgtttttcaagttttcttagctttaaccatggcagctgtt
ggaatttctcaatcaagttccttcgctcctgattccaacaaagccaagattgcggcagct
tccatatttgcaattattgatcgccggtctaaaatagacccaagtgatgagtctgggatg
acactagaaaatgtgaaagggaatatggagcttcgtgatgttagttttaagtatccatca
aggccagatattcaaatcttccaagccttaagcttgtctattcatgctggaaagacagtt
gccctggttggagaaagtgggagtgggaaatctactgtaatctcattattgcagaggttt
tatgatcctgattcaggaactatcactcttgatggagtcaaaatccaaacgctccaattg
aaatggctgaggcaacaaatggggcttgtcagccaagaacctgttttgttcaatgataca
atccgtgccaacattgcatatggaaagggaggaaatgcaactgaagcagaaattataaca
gcatcagagttggccaatgctcatacgttcatcagtgcattacaacagggttacgatacc
gtggtgggagagcgaggacttcaattgtcaggtggacaaaagcaacgcgtagccattgca
cgagccatcgttaaaagtccaaagatactgctattagatgaggctacaagtgcattggat
gcagaatcagagaaagtggttcaggatgcactagataaagtgatggtgaaccgcacgacg
gttgtagttgctcataggctatccacaatcaagaatgcagatgttatagctgtggttaaa
aatggggttattgtagagaaaggaaagcatgacactttgataaacatcaaagatggtttc
tatgcttccttagttgcacttcacatgactgcttccacttcgcagtag
DBGET
integrated database retrieval system
