Gossypium hirsutum (upland cotton): 107923766
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Entry
107923766 CDS
T04793
Name
(RefSeq) syntaxin-112-like
KO
K08486
syntaxin 1B/2/3
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107923766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107923766
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107923766
Membrane trafficking [BR:
ghi04131
]
SNARE
Syntaxin (Qa)
Stx-PM
107923766
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
107923766
Exosomal proteins of other body fluids (saliva and urine)
107923766
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
LMBR1
PSCyt2
Motif
Other DBs
NCBI-GeneID:
107923766
NCBI-ProteinID:
XP_040961499
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All DBs
Position
D11:3955697..3957293
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AA seq
300 aa
AA seq
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MNDLMTKSFLSYVELKKQAEKDLESELDVEKGVGRLNPTDEMNLSKFFQEVASIKITMEE
ITNLVFDLQTLNEDTKSTHSAKVVRGLRDRMESDTVSILRKAKIVKARLESLDKSNANNR
RLSEAYKEGTYVDRTRISVTNGLRANLKQMMNDFQALREKILSDHKEDLKRRYFTVTGEF
PTEDMLEKAVSGSENDRFSLKETVEMDLKNKERHEAVMDIQRSLQRLHQVFLDMAVLVET
QGEKMDDIEENVANAGNFISGGTNNLHYANQMMKKKAWVYWVWGVIVIILVVCVISMLAS
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatctaatgacaaagtctttcttaagttatgtggaactgaagaaacaagcagag
aaagacttggaatcggagcttgatgtcgagaaaggcgttgggcgactcaaccctactgat
gaaatgaacctatctaagttcttccaagaagtggcatcgatcaagataacaatggaagag
attaccaatctcgtgtttgatcttcaaacccttaacgaagacactaagtccactcacagc
gctaaagttgttcgagggttaagagacaggatggaatccgacacggtttccattctcaga
aaagcaaagatcgtcaaggcaaggcttgaatcactcgacaaatccaatgcaaacaacagg
agattatcggaggcatataaagaagggacatatgttgatcgaaccaggatatctgtaacc
aatggcttaagggctaaccttaagcaaatgatgaatgattttcaagccttgagagagaag
attttatcagaccataaagaagacctcaagagaagatactttactgttaccggagagttc
ccgaccgaagacatgctcgaaaaggcggtttccggcagcgaaaacgatcggttttcgttg
aaggagacagtcgaaatggatttgaagaacaaggaaaggcatgaagcagtgatggacatt
caacgaagcttgcaaaggctgcatcaagtgttcttggacatggctgttctggtggagaca
caaggggagaaaatggatgatattgaagaaaacgtggccaatgcaggtaatttcatcagt
ggtggaaccaataaccttcattatgcaaatcaaatgatgaagaagaaagcatgggtttat
tgggtttggggtgttattgttatcatacttgtggtttgcgtcatttcgatgttagcctct
tga
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