Gossypium hirsutum (upland cotton): 107923877
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Entry
107923877 CDS
T04793
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107923877
03036 Chromosome and associated proteins [BR:
ghi03036
]
107923877
Enzymes [BR:
ghi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107923877
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-60S particles
Helicases
107923877
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
107923877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
FlpD
Motif
Other DBs
NCBI-GeneID:
107923877
NCBI-ProteinID:
XP_016709534
UniProt:
A0A1U8L8Q4
LinkDB
All DBs
Position
A11:811737..816197
Genome browser
AA seq
695 aa
AA seq
DB search
MPSLALSDLKEKKEEKMMKKKIALETPESERKTKKIKEPKVREEEDESAVKKSKKKRKAS
ELQVEEEERSETSSELVEPVDPKEKKKKKKKAKVEEEGDGDEDEGKSEDPNAISRFRISE
ALREKLKSKGIEALFPIQAMTFDMILDGTDLVGRARTGQGKTLAFVLPILESLTNGPGKS
SRTSGYGRAPSVLVLLPTRELAKQVFEDFEVYGEAVGLTSCCLYGGAPYHTQEMKLKRGV
DIVVGTPGRVKDHIERGNIHLGSLTFRVLDEADEMLRMGFVDDVELILGKVADASKVQTV
LFSATLPDWVKGIASRFLKPSKKTVDLVGNEKMKASTNVRHIVLPCSKSARSQLIPDIIR
CYSSGGRTIIFTETKDSASELAGLLPGSRALHGDIQQAQREVTLNGFRSGKFMTLVATNV
AARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPKRSSVSKIERESG
VKFEHISAPQPVDIAKSAGVEAAKIITQVSDSVIPAFKDVAQELLETSGLSAQDLLAKAL
AKAAGYSEIKSRSLLTSMENHVTLLLEAGKPIYTLLFVFGVLKRFLPEEKVQSVQGLTLT
ADGMGAVFDVAEDDVETFLTGAENAANVNLEVLKNALPPLQQRDMSRGRFGGGRGGFGDR
NGGGSRFSGGRGGGRGGFSDRRNGGGRGHYNSKRW
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgccttctttggctttatctgacctcaaagagaagaaagaagagaaaatgatgaagaag
aagatcgctctcgaaacacctgaatccgagaggaaaacgaagaagatcaaggaacctaag
gttagagaagaggaagatgaatcggctgtgaagaagagtaaaaagaagcgtaaggcctcg
gagctccaagtagaagaggaggagaggagcgagacgagctcggagcttgttgagccggtg
gatccaaaggagaagaaaaagaagaaaaagaaagctaaggtcgaggaagaaggagatgga
gatgaagatgaagggaaaagtgaggatcctaatgcgatttcgaggtttcggatttcggaa
gcgcttagggaaaagcttaagtccaaggggattgaggctttgttccctattcaagccatg
acttttgatatgattcttgatggcactgatttagttggacgagcacgaaccggtcagggt
aagacactggcctttgtgttgcctatattggagtccttaacaaatggccctggaaaatca
tcaaggacgtctggatatggaagggcaccaagtgttctagtacttttaccaaccagggaa
ttggctaaacaggtttttgaggactttgaagtttatggtgaggcagtggggttgacatca
tgttgtttatatggaggtgctccttaccacacccaagagatgaaactgaagagaggggtt
gacatagttgttgggactcctggacgtgtaaaggatcacatagagaggggcaatattcac
ttagggtcattgacattccgagttcttgatgaagcagatgaaatgttgagaatgggattt
gttgatgatgttgaacttatattaggcaaggtagcggatgcaagtaaagttcagacagtt
ctttttagtgccaccttgccagactgggtgaagggtattgcttcaaggtttcttaaacca
agtaagaagactgttgatctagttggtaatgagaagatgaaggctagtaccaatgttagg
catattgttttgccctgttctaaatctgcaaggtcacagttgatcccagatattatacgt
tgttatagcagtggtggacgaactattatatttactgagacaaaagattctgcctctgag
cttgctggcttattgcctggatcccgggctttgcatggtgacatacagcaggcccaacgt
gaggtcactcttaatgggttccgctcagggaagttcatgacattagtggctaccaatgtg
gcagctaggggattagatatcaatgatgtgcagttaatcatccagtgtgagcctccacgt
gatgtagaagcatacattcataggtctggacgaacaggcagagcaggcaatactggagtt
gctgtcatgctttatgatcctaaaaggtcaagcgtatcaaagatagaaagagaatccggt
gtaaaatttgagcacatatctgctcctcagccagtcgatattgcgaaatctgctggtgta
gaagcagcaaaaataataacccaagtctctgacagtgtaatccctgccttcaaggacgtt
gctcaggagcttttggaaacttctggcctatcagcacaagatctgctcgccaaagcactt
gccaaggctgcaggttattctgagataaagagtagatcccttctaacgtctatggagaac
catgttactttacttcttgaagctggaaaacctatttacacacttttatttgtttttggt
gtcttgaaaagattcttgcccgaggaaaaggttcagtcagtgcaaggtctgacccttact
gctgatggaatgggtgcagtttttgatgttgcagaagatgatgtggaaacatttcttact
ggtgctgaaaatgcagctaatgttaacttagaggtgttgaagaatgcgttgccacccttg
caacagagggacatgtcaagaggaagatttggtggtggacggggtggttttggtgataga
aatggtggtggtagcaggttctctggcggcagaggtggtggccgaggtggattttccgat
agaaggaatggaggtgggcgaggtcattataatagtaagagatggtga
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