Gossypium hirsutum (upland cotton): 107923886
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Entry
107923886 CDS
T04793
Name
(RefSeq) ubiquitin domain-containing protein DSK2a
KO
K04523
ubiquilin
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107923886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107923886
03051 Proteasome [BR:
ghi03051
]
107923886
Membrane trafficking [BR:
ghi04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
107923886
Proteasome [BR:
ghi03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
107923886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
Ubiquitin_2
UBA_NBR1_C
Dsc3_N
Rad60-SLD_2
RPW8
UBA_HOIP
Motif
Other DBs
NCBI-GeneID:
107923886
NCBI-ProteinID:
XP_016709549
UniProt:
A0A1U8L8R9
LinkDB
All DBs
Position
A04:86719247..86724196
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AA seq
555 aa
AA seq
DB search
MGAGGDSSESRLGGNGGGEEGVTVNIRCSNGTKFTARTNLESTVGSFKALLAENCDIPAD
QQRLIYKGRILKDDQTLQSYGLQADHTIHMVRGFAPSSSTPPPSATTNVATDNTMPGVTR
GIGSNDGAGLGASLFPGLNPLGGGGGSGGFGLFGSGLPEFEQVQQQLTQNPNMMREIMNT
PAIQSLMNNPELMRSLIMSNPQMREIIDRNPELGHILNDPSILRQTLEAARNPELMREMM
RNTDRAMSNIEASPEGFNMLRRMYENVQEPFLDATTMGGNNGNSPATNPFAALLGNQGGS
EARSSPINTSTTGSETAQGQTSPNTNPLPNPWSNTAGGGGTQTNATASPNPSGDARTPGV
GGMGGLGLPDLPPMLNGMPDASQLTQLLQNPAISQMMQSIMSNPQYMNQIMNLNPQLRGM
FDMNPQLREMMQNPEVLRQMFSPETMQQMLALQQSLLSLNRQQSTLDSAQTGGTTAAPGT
ANLDLLMNMFGGLGAGGLGVPNQPDVPPEELYATQLSQLQEMGFYDTQENIRALRATAGN
VHAAVERLLGNSGQQ
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgggaggcgattcaagtgagtcacgactcggtggaaatggaggaggtgaagaa
ggagtgacggttaatatacgctgctcgaacggtacgaaatttacggcgaggaccaatctc
gaatccaccgttggatctttcaaagctcttttggctgaaaattgcgatatcccagctgat
cagcaacggttgatttataaagggcgaatcctgaaagacgaccaaacccttcaaagttat
ggtttgcaagctgatcataccattcacatggttcgtggtttcgccccatcttcatctaca
cctcctccttcagctaccacaaatgttgcaactgataatactatgccaggggttactcgg
ggtattggttcgaatgatggtgctggtcttggggcatctttattccctggacttaatcca
cttggtggtggtggcggcagcggtggttttggtttgtttggatccggacttcctgaattt
gaacaagtacagcaacaactaactcaaaatcccaacatgatgagggaaataatgaataca
ccagctattcaaagtttgatgaataacccggagttgatgcgtagtttgattatgagcaat
cctcaaatgcgtgagattattgataggaatccggagcttggacatatacttaatgatcct
agcattcttcgacagacattagaagctgcaagaaaccctgaactcatgcgtgaaatgatg
cgaaacactgatagggctatgagtaatattgaagcctctcctgagggatttaacatgctt
aggcgcatgtatgaaaatgttcaagagccgtttttggatgctacgactatgggtgggaat
aatggaaatagtccggctacaaacccatttgctgctttattgggcaatcaaggtggttct
gaagctagaagttcacctattaacacttctacgactggttctgaaaccgctcaaggccaa
acttccccgaatacgaatcctctgcctaatccttggagcaacactgctggtggtgggggt
acccagaccaatgctactgcaagtccaaatccttctggggatgccaggacaccaggtgtt
ggcggtatgggaggcctcggacttccggatctgccacccatgttgaatggaatgccagat
gcatctcagttgacccagttattgcaaaacccggcaatttctcagatgatgcagagcata
atgtctaatccccaatatatgaatcagatcatgaatctcaaccctcaactacgtggtatg
tttgatatgaatcctcaattgagagaaatgatgcaaaaccctgaagtactacgtcagatg
ttttcccccgagacaatgcagcaaatgctagctttacagcagtcgcttctgtctctcaat
cggcagcaatcaaccctggactcagcacagactggtggtactacagcggcaccgggaact
gccaatctagacttgttgatgaatatgtttggaggtctgggcgctggtggccttggtgtc
cccaaccaacccgatgttcccccggaagaactttacgctacacaattatcacaactccaa
gaaatgggtttctacgatacacaagagaatatcagagcattacgagctactgccggaaac
gtccatgctgcggtcgagagacttctgggaaattccgggcagcagtaa
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