Gossypium hirsutum (upland cotton): 107923904
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Entry
107923904 CDS
T04793
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
ghi04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107923904
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107923904
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107923904
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107923904
03036 Chromosome and associated proteins [BR:
ghi03036
]
107923904
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107923904
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107923904
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107923904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EF3_N
Vac14_Fab1_bd
Htt_N-HEAT_1
PDS5
HEAT_EZ
Adaptin_N
CLASP_N
Cnd1
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
107923904
NCBI-ProteinID:
XP_016709578
UniProt:
A0A1U8L864
LinkDB
All DBs
Position
A11:564778..572438
Genome browser
AA seq
586 aa
AA seq
DB search
MSMIEEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEYANVLLPPLETLCTVEETCVRDKAVESLCRIGAQMREQ
DLVEYFIPLVKRLAAGEWFTARVSSCGLFHIAYPSAPEALKTELRAIYSQLCQDDMPMVR
RSAATNLGKFAATVEAPHLKVDIMSMFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRSELVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPELAIQHILPCVKELSTDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNVKRLAEEFGPDWAMQHIVPQV
LDMINNPHYLYRMTILHAISLLAPVMGSDITCSKLLPVVINASKDRVPNIKFNVAKVLQS
LIPIVDQSVVEKTIRPCLVELSEDPDVDVRFFATQALESCNQVMMS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgattgaagagcctttgtatcccattgcggtgttgattgatgagctcaagaat
gaagatatccagcttcgtttgaactcgattcgtagactttctacgattgcacgtgcactt
ggggaagaaaggactcggaaggaattgattccgtttctgagtgagaataatgatgacgac
gatgaagttctacttgctatggcagaagaattgggggtttttattccttatgttggaggt
gtggaatatgctaatgtattgttacctccattggagactctttgcactgttgaggaaact
tgtgtgagggataaggctgtggagtcattgtgtagaattggtgcgcagatgagggagcag
gacttggttgagtattttattccactagtgaagagattggctgctggtgagtggtttaca
gctcgagtttcctcatgtggattgtttcatattgcataccctagtgccccggaggcacta
aaaactgaattaagagcgatatacagtcagctttgccaagatgacatgccaatggttagg
agatctgctgcgaccaatcttggaaaatttgctgctactgtagaagcacctcatttgaag
gtggacatcatgtctatgtttgatgatttgacacaggatgatcaagattctgttcgccta
ttggctgttgagggttgtgcagcacttggaaagttgttggaaccccaagattgtgtagca
catattctccctgttatagttaatttctcacaggataagtcttggcgtgttcgttacatg
gtcgcaaatcaattatacgagctgtgtgaagctgtcggacctgagcctactaggtcggaa
ctagtacctgcttatgttcgcctacttcgtgataatgaagctgaagtgcggatagctgct
gctggaaaagtaactaagttttgccgaattctgaatccagaattagctattcagcacatt
cttccttgtgtcaaggaactatcaacagattcatcccagcatgttcgatctgctttggcc
tcagttataatgggaatggcacctgttttagggaaggatgcgaccatagagcaattgctt
ccaatatttctttctcttctgaaagatgaatttccagatgtccgactgaacatcattagc
aagcttgatcaagtcaaccaggtgattggaattgatctgctgtcccagtccctattacca
gcaattgtggagcttgcagaggatagacactggagggttcggcttgcgataatagaatac
atccctttattggcaagtcagttgggtgttggctttttcgatgacaaacttggtgcactc
tgcatgcaatggttgaaagataaggtttattccattcgtgatgctgctgctaataacgtg
aagcgcctggctgaagaatttggaccagattgggcaatgcagcatatagttccacaggtt
ttagacatgattaacaatcctcattatctgtatcggatgaccattctacatgcaatttct
ctacttgcccccgttatgggctcagatattacttgctcaaaacttctccctgtggttatc
aatgcttcaaaagatagggtacccaacatcaagtttaatgtggccaaggtgctgcagtca
cttattcctattgttgatcaatctgtggtggagaagacaatccgtccatgcttagttgaa
ttgagtgaggatcctgatgtggatgtgaggtttttcgccacccaagccctagagtcatgc
aatcaggtcatgatgtcttag
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