Gossypium hirsutum (upland cotton): 107923926
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Entry
107923926 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107923926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107923926
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107923926
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
107923926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
zf-C3HC4_2
DUF7567
Motif
Other DBs
NCBI-GeneID:
107923926
NCBI-ProteinID:
NP_001314157
UniProt:
Q9SPH3
LinkDB
All DBs
Position
A11:complement(1416329..1418521)
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AA seq
336 aa
AA seq
DB search
MESDTIECVSSIDEIVEDHEIPHHNLLHHPHPRHAPHHQFSSSKPHHNGTNNVNSISNIV
GPTAIAPAASVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKIRVHDRCPTCRQELGDIR
CLALEKVAESLELPCKYYKLGCPETFPYYSKLKHEGICIYRPYNCPYAGSECSVVGDIPF
LVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMA
PVYMAFIRFVGDETEARNYSYSLEFGANGRKLIRKSAPRSIRDSHRKVRDSHDGLIIQRN
MALFFSGGDRKELKLRVTGRIWKEQQNPDANMCIPN
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggatactatcgagtgcgtatcatctatagatgaaattgttgaagatcatgag
atccctcaccataatctactccaccacccacaccctcgtcatgcccctcatcatcaattt
tcatcgtcaaagcctcatcacaacggcactaataatgttaatagtattagcaatatcgtg
ggtccaacggcgattgctccggctgctagtgtccatgaattgctagaatgtcctgtttgt
accaattctatgtatccaccaattcatcagtgccacaatggacatacactttgttctacc
tgtaaaatacgagtacacgaccggtgcccaacttgtcggcaggaactcggtgatattaga
tgtttagcattggagaaagttgccgagtcccttgagttaccttgcaaatactacaagttg
gggtgcccggaaacattcccctattacagcaaactcaaacacgaggggatttgcatctac
agaccatacaattgtccatatgctggttcagagtgttccgttgttggggatatcccattc
cttgttgcccatttgagggatgatcataaggtcgacatgcacaccggctgcacatttaat
catcgatacgtgaaatccaaccctcgggaagttgaaaatgctacatggatgctaacagta
ttccattgttttggtcagtatttctgcctacactttgaagccttccagttgggaatggct
ccagtttacatggcatttatccgtttcgtgggtgacgagacggaagctaggaactatagc
tacagccttgaattcggagcaaacggacggaaacttatacggaaaagcgccccacgtagc
atccgtgatagtcaccggaaagtcagggacagccatgatggtctaattatccaacgaaac
atggcacttttcttctccggtggggatagaaaggagctgaaactgagggttactggacga
atatggaaggaacaacaaaatccagatgccaacatgtgcataccaaactaa
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