Gossypium hirsutum (upland cotton): 107923961
Help
Entry
107923961 CDS
T04793
Name
(RefSeq) ribonuclease TUDOR 1
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Motif
Other DBs
NCBI-GeneID:
107923961
NCBI-ProteinID:
XP_016709673
UniProt:
A0A1U8L8F7
LinkDB
All DBs
Position
A11:complement(3928854..3934521)
Genome browser
AA seq
997 aa
AA seq
DB search
MAASTASGTGWYKGRVKAVPSGDSLVIMALTSNRPGPPPEKTITLASLIAPRLARRGGVD
EPFAWDSREYLRKLCIGKEVTFRVEYAVPSIGREFGSVYLGGDKNVAMLVVSEGWAKVRE
QGQQKGEASPFLAELLRLEEQAKQQGVGRWSKVPGAAEASIRNLPPSAIGDPSNLDAMGL
LAANKGSPMQGIVEQVRDGSTVRVYLLPDFQFVQVFVAGIQAPSMGRRAAAETVVETDLT
SDEQNGDASAEPRAALTSAQRLAASSTASSEVSPDPFGPEAKYFTEVRCLNREVRIVLEG
VDKFSNLIGSVYYPEGDTAKDLALELVENGLAKYVEWSANMMEDDAKRRLKSAELQAKKA
RLRMWTNYVPPATNSKAIRDQNFTGKVVEVVSGDCIVVADDSIPYGSPLAERRVNLSSIR
CPKMGNPRRDEKPTAYAREAREFLRTRLVGKQVSVQMEYSRKVPMADGAPAASADSRVMD
FGSVFLLSSIKGDGDEVSAANASAAGSQQPGLNVAELVVGRGFGTVIRHRDFEERSNYYD
ALLAAESRAISGKKGIHSAKDPPVMHIQDLTMASAKKARDFLPFLNRGRIPAIVEYVLSG
HRFKLLIPKETCSIAFSFSGVRCPGREEPYSDEAIALMRRKIMQRDVVVEVETVDRTGTF
LGSLWESKTNVAVTLLEAGLAKLQTSFGSDRIPDAHLLEQAELSAKRKKLKIWENYVEGE
EVSNGPATVENKQKELLQVVVTEILGGGKFYVQTVGDQRVSAIQKQLASLTIQEAPVIGA
FNPKKGDIVLAQFSMDNSWNRAMIVNAPRGGVQSPTDNFEVFYIDYGNQEEVPYSQLRPL
DPSLSASPGLAQLCSLAFLKVPSLDDEFGTEAAQFLSEQTMGSSLQFTAMIEERDVSGGK
VKGKGTGTVLIVTLVAEKSDLSINAAMLQEGLARLEKRKRWESKDRKSVIDNLENFQKEA
KTGRRGIWQYGDVDSDDDEDLPTLAAAAAKKTGAGRR
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcaactgctagtggcacgggatggtacaaagggagagtcaaagcagttcca
tcgggggatagcttggtgataatggccttgaccagtaacaggcctggacctccacctgag
aaaaccattaccttggcttctctcattgctcctagactggcccgaagaggaggtgttgat
gagccatttgcctgggacagcagagagtatttgaggaagctctgcattggaaaggaagtc
acttttagagtcgaatatgcagtaccaagcataggccgagaatttgggtctgtttacctt
ggtggtgacaaaaatgttgcaatgttggttgtctctgaaggctgggctaaggttagggaa
caaggacagcagaaaggggaagcaagtcctttccttgctgaattgctacgtcttgaagaa
caggccaaacaacaaggcgtgggtcgatggagcaaggtacctggtgctgctgaggcttct
atacgtaatttacctccttctgccattggtgacccaagtaacttggatgccatgggtctt
ctggctgcaaataagggcagtccaatgcaaggtatcgttgagcaggttcgcgatggtagt
actgttcgagtctatttgcttccagattttcagtttgtgcaggtctttgttgctggtatc
caggccccttcaatgggtagaagggctgctgccgaaactgttgttgaaacagatttgact
tctgatgaacaaaatggagatgcttcagctgagccacgggctgccttaacatcggcacag
aggcttgctgcatcatcgacagcttcttctgaagtttctcctgatccgtttggaccagaa
gcaaaatattttacagaagttcgctgtttgaatagagaggttcgtattgtcctcgaaggt
gtagacaaattcagcaatttgattgggtcagtttattatcctgaaggtgatacagcaaaa
gacctcgctttggagcttgtggaaaatggtctagcaaaatatgttgaatggagtgctaat
atgatggaggatgatgccaagcggcggttgaagtctgcagagcttcaagccaagaaagct
cggctgaggatgtggacaaactatgtaccgccagctacaaattccaaggcaattcgtgat
caaaacttcacaggaaaggttgtggaggttgttagtggggactgcattgttgtggctgat
gattctatcccttatggcagtcctcttgctgagcgccgagtcaatctttcaagcattaga
tgtccaaaaatgggcaatcctcgaagagatgaaaagccaactgcctatgcccgtgaagca
agggaatttttaagaacacgccttgtaggaaaacaggtgagtgtacaaatggaatattcc
aggaaagtccccatggcagatggagctcctgctgcatctgcagattcaagggtaatggat
tttggctcagtcttcctcctgtcttccatcaagggtgatggagatgaggtttctgcagca
aacgcatctgcagctggcagccagcagcctggcttgaatgtggccgagttggttgttgga
cgtggctttggcactgtgataagacatagagattttgaggaaagatcaaactattatgat
gcccttctggctgctgaatcccgtgctatttctgggaagaagggaattcattctgcgaag
gatcctccggtcatgcacattcaagaccttacaatggcatcagccaagaaagctagggat
ttcctgccattcctgaatcgtggcaggattccagctattgtggaatatgtcctaagtggt
catcgtttcaagttgttgatcccaaaggaaacttgtagcattgccttttcattttctggt
gtcagatgtcctggtcgcgaggagccctactcagatgaagccatagctctgatgagacga
aagatcatgcagagagatgtggtggttgaagttgaaactgttgatagaactggaacattt
ttgggatctttgtgggaatcaaaaaccaatgtggctgtgacgcttcttgaggctggcctg
gctaagctacaaacttcatttggtagtgataggattcctgatgctcatcttcttgaacag
gctgagctatctgccaagaggaagaagctgaaaatttgggagaactatgttgaaggagag
gaagtttccaatggacctgccactgttgaaaacaagcaaaaagaactgctacaggtggtg
gttacagaaatattgggtggcggaaaattttatgtccagacggtgggagatcagagagta
tcagctatccaaaaacagcttgcatctttaactatccaagaagctcctgtgattggtgcc
tttaaccctaagaagggtgacatcgtccttgctcagtttagtatggataattcctggaat
cgtgcaatgattgtcaatgcacctcgaggaggagttcaatctcctactgacaactttgaa
gtgttttatattgattatgggaatcaagaggaggttccatacagtcaattacgacctctt
gatccttcattatcagcgtctcctgggcttgctcagctatgtagtcttgcattccttaaa
gttccgagcctggatgatgaatttggtaccgaagctgctcagtttttgagtgagcagaca
atgggaagctcactgcagtttactgctatgatagaggaaagggatgtttctggcggaaaa
gtcaagggaaaaggaactggcaccgttctcattgtaactctcgttgctgagaagtcagac
cttagcattaatgctgcaatgctccaggagggactagctaggttggagaaaaggaagaga
tgggaatccaaggatagaaaatcggtgattgacaacttagagaactttcagaaggaggca
aaaactggtaggcgtggaatttggcaatatggagatgtggattcggatgatgatgaggat
cttcctacacttgcagcagctgctgctaagaagacgggggctggtcgccgatag
DBGET
integrated database retrieval system
