KEGG   Gossypium hirsutum (upland cotton): 107923971
Entry
107923971         CDS       T04793                                 
Name
(RefSeq) tubulin alpha-3 chain-like
  KO
K07374  tubulin alpha
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04145  Phagosome
ghi04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    107923971
  09142 Cell motility
   04814 Motor proteins
    107923971
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107923971
   03036 Chromosome and associated proteins [BR:ghi03036]
    107923971
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ghi04812]
    107923971
   04147 Exosome [BR:ghi04147]
    107923971
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     107923971
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     107923971
Cytoskeleton proteins [BR:ghi04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    107923971
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107923971
  Exosomal proteins of other body fluids (saliva and urine)
   107923971
  Exosomal proteins of colorectal cancer cells
   107923971
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 107923971
NCBI-ProteinID: NP_001314159
UniProt: A9PL17
LinkDB
Position
D11:complement(6816328..6818173)
AA seq 449 aa
MREIISVHIGQAGIQVGNSCWELYCLEHEIHPDGTMPSDTSMGVAHDAFNTFFSETGSGK
HVPRAVFVDLEPTVIDEVRTGPYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RVRKLADNCTGLQGFMVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQTISSLTT
SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQISVPEITNAVFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP
AVVPGGDLAKVQRAVCMISNNTAVAEVFARIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAEGGDDEEEGEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgagagagattattagcgtccacattggccaagctgggattcaggttgggaattcatgc
tgggagctttactgtcttgaacatgaaatccaccctgatggaacaatgccgagcgacacc
tctatgggcgtcgcacacgatgctttcaacactttcttcagcgaaacgggttcgggaaag
catgtgcctagagctgtctttgttgatctggaacccactgttatcgatgaggtccggacc
ggcccttatcgccaacttttccaccctgagcagcttatttccggcaaggaagatgctgct
aataattttgccagaggccactatacaattgggaaggaaattgtggatctctgcctagat
cgagttaggaagttagctgataactgcactggtctgcagggctttatggtgttcaatgct
gtcggcggtggaaccggttctggtcttggatctttgttgttggagcgcttgtcggtggat
tatggaaagaaatcaaagctcgggttcaccatctatccttcgcctcaggtctcaactgca
gttgtggagccttacaatagtgttctgtccactcattcccttcttgagcacacagatgtg
gccgtgctcttggacaatgaagcaatttacgacatatgccggagatccctcgatatcgag
aggccaacttacaccaatttgaaccggctgatttctcaaaccatatcgtccttgacgact
tctttaaggtttgatggagccattaatgtagacattacagagttccaaaccaatcttgtg
ccatatcctcggatccatttcatgctctcttcttatgcgcctgttatctcagctgagaaa
gcataccatgaacagatatcagttcctgagatcacaaacgctgtgtttgagccctcaagc
atgatggccaagtgcgatccaaggcatggcaagtacatggcttgctgcctgatgtatcga
ggagatgtggtgcccaaggatgtgaacgctgctgttgctaccatcaaaacgaagaggacc
gtgcagtttgttgactggtgcccaactggtttcaaatgcggtattaactatcagccccca
gctgttgtccctggaggagatcttgctaaggtgcagcgagctgtttgtatgataagcaat
aacacagcagtggcagaggtgtttgcacgcattgaccacaagtttgatctgatgtactcg
aagagagcatttgtgcattggtatgttggagagggcatggaagaaggtgaattctcggaa
gcccgtgaggatctggctgctcttgagaaggattatgaagaagttggtgctgaaggtgga
gatgatgaagaggaaggtgaagaatattga

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