Gossypium hirsutum (upland cotton): 107923991
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Entry
107923991 CDS
T04793
Name
(RefSeq) autophagy-related protein 18a
KO
K22991
WD repeat-containing protein 45
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107923991
Membrane trafficking [BR:
ghi04131
]
Autophagy
Other autophagy associated proteins
Others
107923991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
ANAPC4_WD40
WDR55
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_Vps41
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_RSE1_2nd
Ge1_WD40
DUF7099
Beta-prop_TEP1_2nd
Med16_N
PEP5_VPS11_N
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
107923991
NCBI-ProteinID:
XP_040937012
UniProt:
A0A1U8L514
LinkDB
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Position
A11:complement(12722811..12726745)
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AA seq
420 aa
AA seq
DB search
MATLSASPSPNPNPNPNFRSPTDQTDHDPESLPQMELHPSSDQDPTPNSNRNFHAVLPTP
PEATAPAAAAAPSLLHISFNQDHGCFAAGIDHGFRIYNCDPFREIFRRDFDRGGGIGVVE
MLFRCNILALVGGGPDPQYPPNKVMIWDDHQSRCIGELSFRSEVRSVRLRRDRIVVVLEQ
KIFVYNFADLKLLHQIETIANPKGLCAVSQGAGSLVLVCPGLQKGQVRVEHYASKRTKFI
MAHDSRIVCFALSQDGQLLATASSKGTLVRIFNTVDGSLLQEVRRGADRAEIYSLAFSSN
AQWLAVSSDKGTVHVFSLKINGGSPGIDRSQSASDPVTSPHSSLSFIKGVLPKYFSSEWS
VAQFRLVEGSQYIVAFGHQKNTVVILGIDGSFYRCQFDPVNGGEMTQLEYHNFLKPEAAF
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggctaccctttcagctagccctagccctaaccctaaccctaaccctaacttccgttcc
ccaacagaccaaaccgaccatgacccggaatctctacctcaaatggagcttcatccttct
tctgaccaggaccccacccccaattctaaccgtaatttccacgccgttcttccgactcca
cccgaggcgactgctcctgcagcggcggcagcgccctctcttctccacatctccttcaac
caggaccacggttgcttcgccgccgggattgatcatggcttccggatttacaattgcgat
ccattccgcgagatatttcgccgggatttcgatcgtgggggaggcatcggagtcgttgag
atgcttttccggtgcaatattttggctcttgttggcggtggacctgacccgcaataccca
cccaataaggttatgatatgggacgatcatcagagccgatgcatcggcgagctttcgttc
cgttccgaagtaagatcggttcggcttcggagggatcgaatcgtagtcgttttggaacaa
aagattttcgtctacaatttcgcggatttgaagctgttgcaccagattgagactatcgcg
aatcctaagggactctgcgcggtgtctcagggggctgggtccttggttttggtttgccct
ggattgcaaaaggggcaagttagggtggagcattacgcctccaagaggaccaagtttatc
atggctcatgattcaagaattgtgtgcttcgcgctttcgcaggacgggcagttgcttgct
accgctagctcgaaagggacgctggttcgaatttttaatactgttgatggtagcttgctg
caagaggtaagaaggggggcagatagagctgaaatttatagtttggcgttctcttcaaat
gcccagtggttagcagtttcaagtgacaaaggcacagtccatgttttcagccttaagatt
aatggtggatctccaggtattgacaggtcacaaagtgcttccgaccctgttacatcaccc
cattcctctctttcttttatcaaaggtgtgttacccaagtacttcagttcagagtggtca
gtggctcaattccgcctggttgaaggttctcagtacattgttgcttttggtcatcaaaag
aatacagtggtaattcttggcattgatggaagcttctaccgatgccaatttgacccggtg
aatggtggggaaatgacccagctggaatatcacaactttctgaagcctgaggcagctttc
taa
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