Gossypium hirsutum (upland cotton): 107924019 Help Entry 107924019         CDS       T04793                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism ghi  Gossypium hirsutum (upland cotton) Pathway ghi03040   Spliceosome Brite KEGG Orthology (KO) [BR:ghi00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     107924019  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ghi03019]     107924019    03041 Spliceosome [BR:ghi03041]     107924019 Messenger RNA biogenesis [BR:ghi03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      107924019 Spliceosome [BR:ghi03041]  Complex B   Other components    Prp19-related factors     107924019  Complex C     107924019 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf Mad3_BUB1_I TPR_19 TPR_15 ARM_TT21_C ARM_TT21 Motif Other DBs NCBI-GeneID:  107924019 NCBI-ProteinID:  XP_016709760 UniProt:  A0A1U8L555 LinkDB All DBs Position D05:complement(14935630..14940387) Genome browser AA seq 913 aa AA seqDB search MSLPKELYPSQDDLLYEEELLRNPFSLKLWWRYLIARSDAPFKKRFIIYERALKALPGSY KLWHAYLRERLEIVRNLPVTHPQYETLNNTFERALVTMHKMPRIWIMYLSTLTEQKLITK TRRTFDRALCALPVTQHDRIWEPYLVFVSQRGIPIETSLRVYRRYLKYDPSHIEDFIEFL VNSNLWQEAAERLASVLNDGQFYSIKGKTKHRLWLELCDLLTTHATEVSGLNVDAIIRGG IRKFTDEVGRLWTSLADYYIRRNLFEKARDIFEEGMTTVVTVRDFSVIFDAYSQFEESMV ALKMENMDLSDEEEEEEEEDEEDIRLDIALCKSKSKFEKKIFKGFWLHDDKDVDLRLARL EHLMNRRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTIDPMKAVGKP HTLWVAFAKLYETYKDLANARVIFDKAVQVNYKTVDHLASIWAEWAEMELRHKNFKGALE LMRRATAEPSVEVKRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGTLESTRAVYERIL DLRIATPQIIINYAFLLEENKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKS KLERARELFEHAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNHEKLDM YEIYIARAAEIFGVPKTREIYEQAIQSGLPDKDVKTMCLKYAELEKSLGEIDRARAIYVF ASQFADPRSDADFWDKWREFEVQHGNEDTFREMLRIKRSVSASYSQTHFILPEYLMQKDQ NIDEAKDKMKQAGISEDEMAALERQLLPAADNAIAKDNSRKVGFVSAGVESQADGGLKTT ANLEDIDLPDESDSDEEKVEIAQKDVPSAVFGGIRKREDGDDIQDGDDASAAKEKGGKSL LGALERIKRQKQA NT seq 2742 nt NT seq  +upstreamnt  +downstreamnt atgtcgctgccaaaggaactatacccatctcaagatgaccttctttacgaagaagaactg ttaagaaatccctttagtttgaaactctggtggaggtatttaatagctagatcagatgcc cctttcaagaaaagatttattatctacgagcgagccttgaaagctttgcctggtagttac aagctttggcatgcttatttacgtgaacgtctcgagattgttcgcaatttacctgttact caccctcaatatgaaacccttaacaatacttttgagagggcgcttgttacaatgcacaag atgcctaggatttggataatgtacttgtcgacgttaactgaacagaaattgattactaag acacgtaggacgttcgatagagcactttgtgcgttgcctgtgactcaacatgataggatt tgggaaccttatttggtttttgtgagtcaaaggggtatccccattgagacatcacttagg gtttataggagatatttgaagtatgatcctagtcatattgaggatttcattgagtttttg gtgaattcaaatctgtggcaagaagcagcagagaggttagcgtctgttttgaatgacggt cagttttattcgataaagggtaaaactaagcatcggttgtggttagagttgtgtgatttg ctcacaacacatgcgacagaggtttcagggcttaatgtggatgcgataatcagaggtgga attagaaaatttacggatgaagttgggagactttggacttcacttgctgattattatatc agaagaaatctgttcgagaaggcgagggatatttttgaggagggaatgacaactgtggtt actgtgagggatttcagtgtcatatttgacgcttattcacaatttgaagagagtatggtt gcccttaaaatggagaacatggatttgagtgatgaggaagaagaagaggaagaggaagac gaagaagacatccgtttggacattgcactgtgcaaatcaaaatccaagtttgagaagaag atatttaaggggttttggttgcatgatgataaggatgttgatttgaggttggctcggtta gagcatttaatgaatagaaggccggaattggctaacagtgtccttttacggcagaatcca cataatgtggagcaatggcaccgtagggtcaagttatttgagggaaatcccaccaagcaa atattgacatacacagaggcagttaggacgattgacccaatgaaagctgttggaaagccc catactctatgggtggcttttgcaaagctgtatgaaacttataaagatctggcgaatgct cgtgtcatttttgataaagctgtccaagtaaattacaagactgttgatcacctggcaagt atatgggctgagtgggcagagatggagctgaggcacaagaatttcaaaggtgcattggag ctaatgagacgtgctacagctgagccttctgttgaagtcaaacgaagagtggctgctgat gggaatgaacctgttcagatgaagctacataaatccttgaggctctggacattctatgtg gacttggaagagagtctgggtacactggagtcaactcgagcggtctatgagagaatactt gatttaagaattgctacaccacaaattataataaactatgcatttttattagaggagaac aaatattttgaagatgctttcaaagtgtacgaaagaggggtcaagatattcaagtatcca catgtgaaggatatatgggtcacttatctgtcgaagtttgtaaagagatatgggaaatca aaactggaacgagcaagggagctgtttgagcatgctgttgaaacggcacctgctgatgca gtaaaacccctgtatcttcaatatgcaaagctggaggaggattatgggctagcaaaacga gctatgaaggtctacgatcaagcgactaaagctgttccaaatcatgagaagcttgacatg tatgagatttacatagcccgtgcagctgagatctttggtgttccaaaaacaagagaaatt tatgagcaggcaatacagtctggccttccagataaagatgtgaagacaatgtgtttgaaa tatgcagagttagaaaagagcttaggagaaattgatcgtgctcgagcaatatatgtattt gcatctcagtttgctgatccacgctctgatgcagatttttgggataaatggagggagttt gaggtgcaacatggtaatgaagataccttcagagaaatgttgcgtattaaacggagtgtc tctgcaagttatagccagacacacttcattctccctgagtatctgatgcagaaggatcag aacatcgatgaagctaaggacaaaatgaaacaggctggtatctctgaggatgaaatggct gctcttgaaaggcagttactacctgcggctgataatgctattgccaaagacaactctagg aaagtagggtttgtgagtgctggagttgagtcacaagccgatggtgggttgaaaacaaca gcaaatcttgaagacattgatttgccagatgaaagtgattcggatgaagaaaaagttgaa attgcacaaaaggatgtcccgtctgctgtgtttggaggtattcggaagagggaagatggc gatgacattcaggatggagatgatgcctcggctgccaaagaaaaaggcggtaagagccta ctgggtgcacttgagcgaattaaaaggcagaaacaagcttag

DBGET integrated database retrieval system