Gossypium hirsutum (upland cotton): 107924021
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Entry
107924021 CDS
T04793
Name
(RefSeq) chloride channel protein CLC-c isoform X1
KO
K05016
chloride channel 7
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107924021
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107924021
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ghi04040
]
107924021
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107924021
Membrane trafficking [BR:
ghi04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
107924021
Ion channels [BR:
ghi04040
]
Chloride channels
Chloride channel (CLC)
107924021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
107924021
NCBI-ProteinID:
XP_016709762
UniProt:
A0A1U8L575
LinkDB
All DBs
Position
A11:5839822..5845867
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AA seq
767 aa
AA seq
DB search
MDQENKVANEEGDIECYYGKDMEDRIYSQPLLTKRHNTTSQIAIVGANACPVESLDYEII
ENELFKQDWRSRRTIQIFQYVLLKWAFALIIGLGTGLVGIFNNIAVENISGFKLLMTTKL
MLEHKYYKAFAALAGCNLALAAAAAALCAYIAPAAAGSGIPEVKAYLNGVDAHSILAPST
LFVKIFGSILCVSAGFVVGKEGPMVHTGACIASLIGQGGSRKYHLTWRWLKYFKNDRDRR
DLITCGAAAGVASAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAIVLRAFIQLCS
TGTCGLFGEGGLIMYDVSAAKVAYSVPDILAVILLGVIGGIFGSLYNYLVDKVLRTYSII
NEKGPAVKILLVVTISLLTSICSYGLPWFATCIPCPIDTTESCPNTDLSGNYKSFQCPPN
HYNDLASLFLNTNDDAIRNLLSTSTTKEFHISSLFIFFIAIYCLGVITYGIAIPSGLFIP
VILAGAGYGRLIGRLFDPITKLDVGLFALLGAASFLGGTMRMTVSLCVILLELTNDLLLL
PLVMLVLLISKTVGDMFNHGVYDQIVKLKGLPYMEAHAEPYMKHLVARDVVSGPLITFSG
VEKVGNILHALKTTGHNGFPVIDEPPFADAPELCGLVLRSHLLVLLKGKIFSWDRVLSGD
EVVRRISKFDFAKAGSGKGVKLEDLDIKDEEMDMYVDLHPITNTSPYTVVETMSLAKAAV
LFRQLGLRHMCVVPKSQGRPPIVGILTRHDFLPEHILGLYPHIRLRK
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggaccaagaaaataaagtagcgaatgaggaaggtgatattgaatgctactacgggaag
gacatggaggataggatctacagtcaacccctgttgactaagagacacaacaccacatcc
cagatcgctattgtgggtgccaatgcttgtcccgttgagagccttgattatgagattata
gaaaatgaattattcaagcaggactggagatcaaggaggacgatccaaatatttcagtat
gttctgcttaaatgggcatttgcacttattataggcctcggcactggacttgttgggatc
tttaacaatatagcagttgagaatatttctgggttcaagctgctaatgaccacaaaactc
atgctcgagcacaaatactacaaggcttttgcagctttagctggttgcaatttagctctg
gcagcagcagctgcagctctttgtgcttatattgctccagcagcagcaggttctggtatt
cctgaagtgaaagcctatctcaatggcgtggatgctcattcgatactggctccaagtact
ctctttgtaaagatttttggttcgatcctatgtgtatctgctggatttgttgtcggcaaa
gaagggcctatggttcatacaggtgcttgcatagcttctttaattggacagggaggttcg
cgaaaataccatttgacttggagatggcttaaatatttcaaaaatgatcgtgataggcgg
gacctgattacttgtggagctgctgctggtgtggcttccgcctttcgtgctccagttggc
ggtgtactctttgcccttgaagaggcagcatcatggtggaggagtgcacttctttggaga
acctttttcacaacagcagtagttgctatagttttgagagctttcatacaattatgctct
actggaacttgtggtttgtttggggaaggaggactaattatgtatgatgtcagtgcggcc
aaagtggcatatagcgtgccagatattcttgctgtgatacttctaggagttattggaggc
atttttggaagcttatataactatcttgtggataaggtccttcgcacttacagcatcatt
aatgaaaaaggacctgctgttaagatcctacttgttgttaccatctccctgttaacatca
atctgttcctatggattgccatggtttgctacatgcatcccttgccccattgacacgact
gaaagctgccccaacactgatctatctggaaactataaaagctttcaatgtccaccaaat
cattacaatgatctggcctccctctttctaaatactaatgatgatgctatccgtaaccta
ttgagtaccagtactacgaaagaatttcatatctcctcccttttcattttcttcattgct
atttactgccttggtgttatcacttatgggatagctatcccctctgggctcttcattcct
gtcatattggctggagctggctatggccgccttattggtagactatttgatccgatcact
aaactcgatgttggtctgtttgccctccttggggcagcttcttttcttggtggcactatg
agaatgacagtttccttgtgtgttatactgcttgagctcactaatgatctgttgctgctt
ccacttgtcatgctggttctccttatctcgaaaactgtgggtgatatgttcaaccatggg
gtctatgaccaaatagtaaaactaaaaggattgccatacatggaggctcatgcagaaccg
tacatgaaacatttagttgctcgagatgttgtttctggtcctttaatcaccttttctggt
gttgagaaggtcggaaacatattacatgctttgaaaactacagggcataacgggttccct
gttattgatgaaccacctttcgcagatgctcccgagttgtgtgggcttgttctaagatct
catttacttgttttacttaaaggaaagatattttcatgggatagggtactttcaggagat
gaggtagtacgtagaatctccaaatttgacttcgccaaggcagggtcaggaaagggagtc
aaactagaggatcttgatatcaaagacgaggaaatggacatgtatgttgatctccatcca
atcaccaatacatcaccgtacacagtggttgagaccatgtcacttgccaaagctgcagtt
ctcttccgtcagctaggtctccggcacatgtgtgtggtaccaaagagtcaggggaggcct
ccaattgttggaattctgacccggcacgacttcctgccggagcatatattgggactgtac
cctcacatcaggcttcggaaatga
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