Gossypium hirsutum (upland cotton): 107924048
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Entry
107924048 CDS
T04793
Name
(RefSeq) protein transport protein Sec24-like At4g32640
KO
K14007
protein transport protein SEC24
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107924048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107924048
Membrane trafficking [BR:
ghi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
107924048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
107924048
NCBI-ProteinID:
XP_040950251
LinkDB
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Position
D05:22077977..22091520
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AA seq
1104 aa
AA seq
DB search
MAAPVPPGAPRPGANARQQSPHPNFNPNFQTNPNSLADNMQNMNLNRPHSMPNSGPRPSP
FGQPPPFPQSSVTAGFPVASPPMSRPGPPPGMVGRPAVIPAGPLQSTLPANVPPGRPVGL
PVSHPPPFGSRPPPASLSSSTGGAVLPSSAFPSSGVSSAAAAPPPPGTRPSSFVSSSPLI
GGPAGPMSSARAGPSSNGPPAVGAGALPGAPQFPPPAIVSQPPVGPPPSMMSARAPAQAP
TMHSVLGSSAASSPQTPPLPSASSPFPAMTQARPPPPGSPYGPQTWSMQPQQGTQPSHIP
GSTHAQRPRMFGMPQQALPNQAMTNIPPALGQPGAPMSGSSKIDPNQIPRPIPNATPIVY
ETRHGNSANPPPPATSDYIVRDTGNCSPRYMRCTINQIPCTGDLLTTSAMQLALLVQPMS
LPHPSEDPIQVVDFGESGPVRCSRCKGYINPFMKFIDQGRKFICNLCGFTDDTPRDYHCN
LGPDGRRRDADERPELCRGTVEFVASKEYMVRDPMPAVYFFLIDVSMNAVQTGATAAACS
AINQVISDLPEGTRTQVGIATFDSTIHFYNLKRALQQPLMLIVPDIQDVYTPLETDVIVQ
LSECRQHLELLLENIPTMFQTSTTAESCFGAAIKAAFLAMKSTGGKLLVFQSVLPSVGIG
ALSSREAEGRTNISASEKEAHKLLQRADKILKTMAIEFAEYQVCVDVFVTTQTYVDIASI
SVIPRTTGGQVYYYYPFSAVSDPAKLYNDLRWNITRPQGFEAVMRVRCSQGIQVQDYSGN
FCKRIPTDVDLAGIDCDKCILVTLKHDDKLQDGSECGFQCALLYTTVYGQRRIRVTNLSL
PCTNMLSNLFRSADLDTQFTCFLKQAAIEIPTCPLLQVRDHVTNLCINILLSYRKFCATV
SSTGQLILPEALKLLPLYTLALIKSRGLRNDGRIDDRSFWFNYVSSLSTPLAIPLVYPRM
FAIHNVDTKDGNESVLPPTIPLSSEHVCDDGIYLLENGEDALIYFGSSVDSSILQQLFGF
TSVDEVPTQFVMQQFSNPLSKNFNDVVNVIRQQRCSYLRFALCKKGDPSGMAFVSCMVED
KNANGPSYVEFLVHIHRQIQMKMS
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcctgtgcctccaggggcacctagacccggcgccaatgcacggcagcaatca
ccacatcctaattttaatcctaattttcaaaccaatcccaattccttagccgataacatg
cagaatatgaacctaaatcggccacactctatgcccaattctggtcctaggccttcacct
tttggtcaaccaccaccctttcctcaatcttcagtcactgctggattcccagttgcttcc
ccgccaatgtcacggcctggaccaccaccaggtatggtgggaagacctgcagtgattcct
gctggaccgctgcaatccacattacctgcaaatgtacccccaggaagaccggttggtttg
cctgttagtcacccacccccttttgggtctagacctcctcctgcctcattgtcttcatct
acaggtggcgcagttctaccttctagtgctttcccatcttcaggtgtatctagtgccgca
gctgcaccaccaccaccaggtacccgccctagttcttttgtgtcatcttcacctttgatt
ggtggtcctgctgggccaatgtcaagtgcacgcgctggtccttcgagtaatgggccacca
gcagttggcgcaggagctttgcctggtgcaccccaatttcctcctcctgcaattgtttca
caacctccggttggacctccaccatctatgatgtcagctagggcacctgctcaggctcca
actatgcattctgttttgggaagttcagctgctagttccccacaaactcctcctcttcca
tcggcatcatcaccatttccagccatgacgcaggctagaccacctcctccaggttctcct
tatggaccacagacatggtcgatgcaaccccagcagggaacccaaccttctcatattcct
ggctctactcatgcacaacgtccaagaatgtttggaatgccacaacaagcactaccaaat
caagctatgactaacattccacctgcactgggccaacctggagcacctatgtcagggtca
tcaaagattgatcctaatcaaattccaagacctattccaaatgcaacaccaatcgtttat
gaaactcgccatggcaactcagcaaatcctcctccgcctgctacaagtgattacattgtc
agagacaccgggaattgtagtccacgatatatgagatgtaccatcaatcagatcccttgc
acgggcgaccttttgacaacctctgcgatgcagctggctttgttagtacaacctatgtcc
ctccctcatccatcggaggatcctattcaggtcgtggattttggggaaagtggtcctgtt
cgatgttctcgctgcaaaggttacataaatcctttcatgaagttcattgatcagggaagg
aagtttatctgcaatttgtgtgggtttactgatgatactccccgtgactaccattgcaac
cttggtcctgatggccggcgtagagatgctgatgagaggcctgagctttgtagaggaaca
gttgaatttgttgcttcaaaagagtacatggtccgtgatccaatgccggctgtgtatttt
ttcctaattgatgtgtccatgaatgctgtgcaaactggtgccactgctgcagcttgcagt
gcgattaatcaagttatttctgatcttcctgaaggtactcgtacacaggtcggaatagca
acatttgactcaacaatccatttttataatttaaaacgggcactgcaacagccattgatg
cttatcgttcctgacatacaagatgtctatacccctcttgaaacagatgtcattgttcag
ctttctgagtgccgccagcatttagagctattgcttgaaaacatcccaacaatgtttcag
actagtacaactgctgagtcatgttttggtgctgcaattaaggctgcattcttggccatg
aaaagtactggagggaagcttctagtgtttcagtcagtcttgccatctgttggcattggt
gccctatcttctagggaggctgaagggagaactaacatttctgctagcgaaaaggaggct
cataaattactgcaacgagctgacaaaattctcaagacaatggcaattgaatttgctgag
tatcaggtctgtgtcgatgtttttgtaactactcagacttacgtggatattgcttccatc
tctgtcatcccaagaacaactggaggccaggtttattattattaccccttctctgctgta
tctgatcctgcaaagctctacaatgaccttagatggaacatcactaggccccaaggtttt
gaggctgtcatgcgcgtaagatgcagccagggtattcaagttcaagattactctggaaac
ttctgcaaacgcattccaactgatgttgacctagctgggattgactgtgacaaatgcatt
ttggtaacattaaagcatgatgacaaattacaagatggttctgaatgtggctttcagtgt
gcccttctctataccactgtttatggacaaagaagaattcgagtcacaaacttatccttg
ccgtgcacaaatatgctaagtaatttgtttcgctctgctgacttggatactcaattcaca
tgtttcttaaagcaagctgcaattgaaattcctacatgcccgcttcttcaagtgagggac
catgttacaaatctttgcatcaacattctgctttcatatcgtaaattttgcgccacagta
tcatcaactggacagcttattcttcctgaggctcttaagcttctccctctgtatactctt
gcattaatcaagagtagagggttgcgaaatgatggcagaatagatgaccgttccttctgg
ttcaattatgtttcctccctttctactcctttggcaatcccattggtttatcccaggatg
tttgccatccacaatgttgatacaaaggatggaaatgaatctgttcttcctcctacaatc
ccactttctagtgaacatgtctgtgatgatggaatctatcttcttgagaatggtgaggac
gctttaatatattttggaagctcagtggattcaagtatcttgcaacaactttttggcttt
acctcagtcgacgaagtacccactcagtttgtgatgcagcaattttccaatcctttatca
aagaacttcaatgatgtagtcaatgtgattcgccaacaaagatgctcctaccttcgtttc
gcattgtgcaagaagggggatccgtcgggaatggcgttcgtatcttgcatggtagaagac
aagaatgcaaatgggccatcgtatgtggagtttcttgtacatattcatcggcaaatccaa
atgaaaatgtcttga
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integrated database retrieval system
