Gossypium hirsutum (upland cotton): 107924051
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Entry
107924051 CDS
T04793
Name
(RefSeq) protein NPGR2
KO
K21843
tetratricopeptide repeat protein 7
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107924051
Membrane trafficking [BR:
ghi04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
107924051
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_11
TPR_14
TPR_8
TPR_12
ANAPC3
TPR_1
TPR_16
TTC7_N
ARM_TT21_4th
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
107924051
NCBI-ProteinID:
XP_016709806
UniProt:
A0A1U8L5C1
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All DBs
Position
D11:13709417..13714737
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AA seq
732 aa
AA seq
DB search
MKSKIRIKQPRRGGLRRDLGQIMKCLCTGEQLRKVDEMIPSSESLAAKDYSLSGYSSKIG
VPEKKPDTRNIEEAELSLRESSSLNYEEARALLGRIEYQKGNIEAALHVFEGIDIAAISP
KMKLTLSKRVDRRKRRSHDYAPPPMSIHAVSLLLEAIFLKAKSLQHLQRFREAAQSCTVI
LDIVESSLPEGLPENFGADCKLQETLIKAVELLPELWKFGDSPHEAILSYRRALLHQWNL
DAETTARIQKQFAIFLLYCGGEASPPNLRCQIDSSFVPRNNIEEAILLLMILLRKVSLKR
IEWDPSILDHLSFALSMSGDLRALANQIEELLPGVISRKERYNFLALCYYGAGEDLVALN
LLRKLLQSNEDPHCVPALLMASRICGGKPNLAEEGIKFAHRALESLDEECSELEGTGNLL
LGVARSTHSNSALSDSERVSRQSEALQALERAWKITSMKDPNILYYLCLENAEQRKLEAA
LYYAKYLLKLEGGSNIKGWLLLARILSAQKRFVDGEIVLNAALDQTGKWDQGELLRTKAK
LQIAQGQLKSAIETYSQLLAVLQVQSKSFGSGKRLHKDHSSRSFEQEIWHDLAYLYISLS
QYQDAEVCLSKSKAINSYSAIRSHATGVLYEGKGLLKEALKAYWNALGMDPNHALSLISA
AVVLRQLGGQSDAVVKSLLMNALRVDRMNPSAWYTLGLLHKDEDSPSSLCEAAQCFEAAV
ILEESAPVEPFR
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcaaaatacggattaaacagccgagaagaggtggacttaggcgggatttaggg
cagataatgaagtgtttatgcactggagaacaattaagaaaagtagacgaaatgatacct
tcatcagaatcccttgctgccaaagattattcactgagtggttattcttctaaaattggt
gttcctgagaaaaagccagatactaggaatatagaagaagctgaattgtccctgcgtgaa
agtagttcacttaattatgaggaagctagagcattgctaggaagaattgaatatcagaaa
ggaaatatagaagctgcactgcatgtgtttgaaggaatagatattgcggcaatatctccc
aaaatgaaactcaccctttccaaaagagttgatcgacgtaagaggcgatctcatgactat
gctcctccaccaatgtctatacatgctgttagtttactactagaagcgatctttctaaaa
gcaaaatcattgcagcatctccagaggtttagagaagctgctcaaagttgtacagtcatt
ctggacatagttgaatcttccttaccagaaggcttgcctgaaaattttggtgctgactgt
aaattgcaggagactctaatcaaggcagtcgagctgcttccagaattatggaaatttggt
gattctccacatgaagcaatcttgtcctaccggcgagctcttctccatcagtggaatctt
gatgcagaaactactgcaaggattcaaaaacagtttgccatttttcttctgtattgtgga
ggtgaagcaagccccccaaacctccgctgccaaatcgacagttcgtttgtccctaggaat
aacatagaggaagctatactcctgttaatgatacttctaagaaaagtatctttgaaaaga
attgaatgggatccgtcaattttggatcatttgtcatttgctctctccatgtctggggat
ttgagagctttggctaaccaaatagaagaactgcttccaggggttattagccgcaaagag
agatacaattttctagctctctgttattacggagcaggtgaggatttggttgctttgaat
ctattgcggaaattgttacagagtaatgaggatccacactgtgttccagcattgttaatg
gcatcaagaatttgtgggggaaaacctaatcttgcggaagaagggattaaatttgctcat
agagctcttgaaagcctggatgaagaatgcagtgagttggaaggtactggtaaccttcta
ttgggtgtggctcgatcgacacattcaaactcagccttatctgattctgagagggtgtcc
agacagtctgaggcccttcaggccttggaacgggcttggaaaattacaagtatgaaagac
cctaacattctttactacctctgcctggaaaatgctgagcagagaaagttggaagctgcg
ctatattacgcaaagtatttgctaaaactagaaggtggttctaacattaaagggtggttg
ttgttggctcgcatattgtcagctcaaaaacgttttgtggatggtgaaatcgttctcaat
gcagccttggaccaaactggcaaatgggatcagggagaattattgcgcaccaaggctaag
cttcaaattgcacagggacagctcaagagtgcaattgagacatacagtcagcttcttgct
gttcttcaagttcagagtaaaagctttggttctggcaaaaggcttcataaggatcattct
tcaagaagtttcgaacaggagatatggcatgatctagcttatctctacataagcttgtca
cagtatcaggatgctgaggtttgcctttcaaaatccaaggccatcaattcttactctgct
attagaagtcatgccactggtgtactttacgagggaaaaggcttattaaaagaagctctg
aaggcttactggaatgctttgggcatggacccgaatcatgccctgagcttgatatctgca
gcggttgtgttgagacaacttggcggccaatctgatgcagtggtgaaaagcttgctgatg
aatgctctccgagttgatagaatgaatccgtcagcatggtatactctgggtctccttcac
aaagatgaagattctccgtcttcactatgtgaagcagctcaatgctttgaggctgcagtt
attcttgaagaatcggcgcctgttgagcctttcagatag
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