Gossypium hirsutum (upland cotton): 107924059
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Entry
107924059 CDS
T04793
Name
(RefSeq) myosin-6 isoform X1
KO
K10357
myosin V
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
107924059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107924059
04131 Membrane trafficking [BR:
ghi04131
]
107924059
03029 Mitochondrial biogenesis [BR:
ghi03029
]
107924059
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ghi04812
]
107924059
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
107924059
mRNA cycle factors
P-body specific factors
107924059
Membrane trafficking [BR:
ghi04131
]
Others
Actin-binding proteins
Myosins
107924059
Mitochondrial biogenesis [BR:
ghi03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
107924059
Cytoskeleton proteins [BR:
ghi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
107924059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
ABC_tran
ProQ_C
TSC22
DUF87
Motif
Other DBs
NCBI-GeneID:
107924059
NCBI-ProteinID:
XP_016709815
UniProt:
A0A1U8L5C7
LinkDB
All DBs
Position
A11:15988413..16003267
Genome browser
AA seq
1514 aa
AA seq
DB search
MAATTSLVVGSLVWVEDPDDAWIDGEVVEVKGEDIKVLCTSGKTVVVKASNVYPKDAEAP
PCGVDDMTKLAYLHEPGVLQNLRSRYDMNEIYTYTGNILIAVNPFRRLPHLYDSHMMAQY
KGAAFGELSPHPFAVADAAYRLMMNEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRA
AAEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDRSGRISGAAIRTYLLE
RSRVCQVSDPERNYHCFYMLCAAPPEDIQRFKLGNPRTFHYLNQSNCYELDGVDESKEYA
ATRRAMDVVGISSDEQDAIFRVVAAILHLGNIEFAKGKEIDSSVPKDEKSRFHLRTAAEL
FECDEKLLEDSLCKRVIVTRDETITKWLDPLSAALSRDALAKTVYSRLFDWIVDKINSSI
GQDPDSKYLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIN
WSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKL
SRSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLNASKCSFVSSLFPPLAEESSKSS
KFSSIGSRFKQQLQALLETLSSTEPHYIRCVKPNNLLKPSIFENKNVLQQLRCGGVMEAI
RISCAGYPTRKQFDEFVDRFGLLAPKVLDGSSDEVAACKKLLEKVGLQGYQIGKTKVFLR
AGQMADLDTRRIEVLGRSASIIQRKVRSYLARRSFIVLRRSALQIQSVCRGQLARKVFEG
MRREAASLRIQRDLRMHLARKAYKELFSSAVSIQTGMRGMAARNELRFRRQTRAAIIIQS
QCRKFLTRLHYLKLKKAAIATQCAWRGRVARKELRKLKMAARETGALQAAKNKLEKQVEE
LTWRLQLEKRMRVDLEEAKTQENAKLQSALQDIQLQFKETKELLAKEREAAKKAAEVVPI
IQEVSVVDPLMLEKLTNENEKLKALVSSLEKKIDETEKKFEETSKISEERLKQALDAESK
IVQLKTVMHSLEEKISDIESENQVLRQQTLLNSPAKKVSQLPPIPVFPNLENGHHMDELN
KSNEPESATPVKKAGAESDGRLRRSNLERQHENVDALVNCVSKDIGFSQGKPVAAFTIYK
CLLHWKSFEAERTSVFDRLIQMIGSAIENEENNGHMAYWLSNTSTLLFLLQKSLKAAGSS
GATPSRKPTAATSLFGRMTMGFRSSPSSNNLAAAAALAVVRQVEAKYPALLFKQQLAAYV
EKIYGIIRDNLKKELSSLLALCIQAPRTSKGSVLRSGRSFGKDSASTHWQSIIDSLNTLL
STLKGNFVPSVLIQKIYTQTFSYINVQLFNSLLLRRECCTFSNGEYVKAGLAELELWCCQ
AKEEFAGSSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDDN
YNTRSVAPNVISSMRVLMTEDSNDAASSSFLLDDNSSIPFSVDDLSNSLQEKDFLEVKPA
EELLENPAFQFLHE
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacaactagtcttgtagttggatctcttgtctgggtggaagatcctgatgat
gcttggatcgatggtgaagtcgtggaggttaaaggcgaagatattaaagtcctatgcact
tcagggaagacggttgttgttaaagcttcaaatgtctatcctaaagatgctgaggcccca
ccttgtggagtagatgatatgacaaagctggcttatttgcatgaaccgggtgtgctccag
aatttacgatcaagatatgatatgaatgaaatatatacatatacaggaaatatattgatt
gctgtaaacccattcagaagactacctcatctttatgatagccatatgatggcacaatat
aagggggcagcctttggtgaattgagtccacatccctttgctgtagcagatgctgcatac
agattaatgatgaatgagggaattagtcagtcgattttggtcagtggtgaaagtggggct
ggtaaaacagaaagcacaaaattgcttatgagatatcttgcttacatggggggtagagct
gctgctgagggaagaacagttgagcagcaagttctagagtcaaaccctgttttagaagca
tttggtaatgcgaagactgttaggaacaacaactcaagtcgctttggtaagtttgtggag
attcaatttgatcgaagtggaaggatttcaggagctgcaatcagaacttatttgctagaa
agatcacgagtttgtcaagtgtctgatcctgagagaaattatcactgtttctacatgctt
tgtgctgcaccaccagaggatattcagcggtttaaattaggaaacccgagaacgtttcac
tatctgaaccaatctaattgttatgagttggatggcgttgatgagtctaaggaatatgct
gcaacgaggagggcaatggatgttgttggaataagttctgatgagcaggatgccatattc
cgtgttgtggctgcaattcttcatcttgggaacattgaatttgccaaagggaaggaaata
gactcatcagtacctaaagatgaaaaatctcggtttcatctgaggactgcagctgagctt
tttgagtgcgacgaaaagttactagaagattctctttgtaagcgcgtaatcgtaactcgt
gacgaaaccattacaaaatggctggacccattatctgctgcgcttagtagagatgctttg
gctaaaactgtgtactcgaggttgtttgactggattgtggataagatcaatagttcaatt
ggtcaagatcctgactcaaagtacttaattggggtgctggatatttatggatttgagagt
ttcaagactaacagttttgagcaattctgcattaatttgacaaatgagaagttgcagcag
catttcaaccagcacgtcttcaaaatggagcaagaagagtatacaaaagaagaaattaat
tggagctacattgaatttgttgataatcaggatgttcttgacctcattgaaaagaaacca
ggtggcataattgctcttctagatgaggcttgcatgtttccaagatcaacccatgaaact
tttgctcagaagctgtaccagacatttaaaaaccataagcggttcagcaagcccaaattg
tctcgtagtgatttcaccatttgccattatgctggtgatgtcacttatcaaaccgagttg
ttcctggacaagaacaaagattatgttgtagctgaacatcaggcccttttgaatgcttca
aaatgttcctttgtttctagtttatttccacctttagcagaggaatcttccaaatcgtca
aaattctcttcaataggttctcgatttaagcaacaattacaagcattacttgaaactctc
agttccactgagccacattacatacgttgtgtaaagcccaataatcttcttaagccgtca
atatttgagaataaaaatgttctacaacaactacgatgtgggggggttatggaggctatc
aggattagctgtgctggatatcctactagaaaacaatttgatgaatttgtggaccgattt
ggtcttcttgcacctaaagttttggatggaagttctgatgaggttgctgcgtgcaaaaag
cttctagagaaggtcgggcttcaaggctatcagattggtaagacaaaggtttttcttagg
gctggtcagatggctgatctggatacccgtaggattgaagtcttaggaagatctgctagc
attattcagaggaaagttcgttcttatttagctcgcagaagtttcattgtgcttcgccga
tctgcattacagattcaatctgtctgcagagggcaacttgctcgcaaagtgtttgaaggc
atgagaagagaagcagccagtttaaggatccagagagatttgcgcatgcatcttgctagg
aaagcttataaagaattgttctcctctgctgtttccattcagacaggcatgcgggggatg
gctgctcgcaatgagttacgcttcagaaggcagaccagagcagctattataattcagagc
caatgtcgcaagttcttgacccggttgcattatctgaagttgaagaaagcagcaattgca
acacaatgtgcatggagaggaagagtagctcgtaaagaactgcggaagcttaagatggct
gctagggagacgggagctctgcaagctgcaaagaacaaactggaaaagcaagttgaggaa
ctgacatggagattacaactggagaaacgaatgagggttgacctggaagaagctaaaaca
caagaaaatgcaaaactgcagtctgctttgcaagacatacaacttcagtttaaagaaact
aaagaattgcttgccaaggaacgtgaggctgccaaaaaggcagctgaggtagtccctata
attcaggaggtttcggtggtggaccctctgatgttggagaagcttacaaatgagaatgaa
aaactgaaggcattagtgagttcgttggaaaagaaaattgatgaaacagagaaaaagttt
gaagagacaagcaaaataagtgaagaaaggttgaaacaagctttggatgccgaatcaaaa
atagttcagttgaagactgttatgcacagtcttgaagaaaagatttcagacattgaatct
gaaaaccaagttttgaggcagcaaaccctattaaattcgcctgctaagaaggtttcacag
cttccaccaattccagtctttccgaatttggaaaatggtcaccatatggatgaattgaac
aaatcaaatgaaccagagagtgcgactccagtgaagaaggctggtgcagaatctgatggc
aggttgcgaagatccaatcttgaacgtcaacatgagaatgttgatgcactggtcaattgc
gtttcaaaagacattgggttcagtcaagggaaacctgttgcagcatttaccatatataaa
tgtcttctccactggaaatcttttgaagcagaaaggaccagtgtgtttgatcgtcttatt
cagatgattggttctgcaattgagaatgaagaaaacaatggtcatatggcatattggttg
tccaacacatcaactttactgtttttgctccaaaaaagtcttaaagctgctggttcaagt
ggcgcaactccaagtcggaagccaactgctgcaacctctctgtttggaaggatgacaatg
ggtttccgctcatctccttcttccaacaatcttgctgctgctgctgcacttgcagtagtt
cgccaagtagaggccaaatatcctgctttacttttcaagcagcaacttgcagcatatgtg
gaaaaaatctatggaatcattagggacaacttgaagaaagagttatcatctttgcttgct
ctatgcatccaggctccgagaacatctaagggaagtgtactacgatctgggcggtctttt
ggcaaagattctgcttcaactcactggcaaagcattattgatagcctcaacaccctccta
agtactttgaaaggaaattttgtgccttctgttcttatccagaagatttatactcaaaca
ttttcatacatcaatgtacaattgtttaatagcctcctcctacgccgtgagtgttgtacg
tttagcaatggagaatatgtcaaggctgggttagccgagttagagctttggtgctgccaa
gcaaaagaagagttcgctgggtcatcgtgggatgaacttaagcacataaggcaggctgtt
ggattcttggttatacatcagaagtacagaatttcatatgatgaaattacaaatgatctc
tgccctattcttagtgtacagcagttatacagaatatgtacgttgtactgggatgacaat
tacaatactcgaagtgttgctccaaatgttatttccagcatgagggtactaatgacagag
gattccaatgatgctgctagcagttcctttttattggacgacaattccagcatccccttc
tctgtcgatgacctttccaattcgcttcaagagaaagacttcttggaagtcaaaccagca
gaggaacttcttgagaatccagccttccaatttttacacgagtaa
DBGET
integrated database retrieval system
