Gossypium hirsutum (upland cotton): 107924106
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Entry
107924106 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: myosin-6
KO
K10357
myosin V
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
107924106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107924106
04131 Membrane trafficking [BR:
ghi04131
]
107924106
03029 Mitochondrial biogenesis [BR:
ghi03029
]
107924106
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ghi04812
]
107924106
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
107924106
mRNA cycle factors
P-body specific factors
107924106
Membrane trafficking [BR:
ghi04131
]
Others
Actin-binding proteins
Myosins
107924106
Mitochondrial biogenesis [BR:
ghi03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
107924106
Cytoskeleton proteins [BR:
ghi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
107924106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
ProQ_C
TSC22
DUF87
Motif
Other DBs
NCBI-GeneID:
107924106
NCBI-ProteinID:
XP_016709889
UniProt:
A0A1U8L9R8
LinkDB
All DBs
Position
D11:13991068..14005564
Genome browser
AA seq
1514 aa
AA seq
DB search
MAATTSLVVGSLVWVEDPDDAWIDGEVVEVKGEDIKVLCTSGKTVVVKASNVYPKDAEAP
PCGVDDMTKLAYLHEPGVLQNLRSRYDMNEIYTYTGNILIAVNPFRRLPHLYDSHMMAQY
KGAAFGELSPHPFAVADAAYRLMMNEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRA
AAEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDWSGRISGAAIRTYLLE
RSRVCQVSDPERNYHCFYMLCAAPPEDIQRFKLGNLRTFHYLNQSNCYELDGVDESKEYA
ATRRAMDVVGISSDEQDAIFRVVAAILHLGNIEFAKGKEIDSSVPKDEKSRFHLRTAAEL
FECDEKLLEDSLCKRVIVTRDETITKWLDPVSAALSRDALAKIVYSRLFDWIVDKINSSI
GQDPDSKYLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIN
WSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKL
SRSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLNASKCSFVSGLFPPLAEESSKSS
KFSSIGSRFKQQLQALLETLSSTEPHYIRCVKPNNLLKPSIFENKNVLQQLRCGGVMEAI
RISCAGYPTRKQFDEFVDRFGLLAPEVLDGSSDEVAACKKLLEKVGLQGYQIGKTKVFLR
AGQMADLDTRRIEVLGRSASIIQRKVRSYLARRSFIVLRRSALQIQSVCRGQLARKVFEG
MRREAASLRIQRGLRMHLARKAYKELFSSAVSIQTGMRGMAARNELRFRRQTRAAIIIQS
QCRKFLARLHYLKLKKAAIATQCAWRGRVARKELRKLKMAARETGALQAAKNKLEKQVEE
LTWRLQLEKRMRVDLEEAKTQENAKLQSALQDIQLQFKETKELLAKEREAAKXAAEVVPI
IQEVSVVDPVMLEKLTNENEKLKALVSSLEKKIDETEKKFEETNKISEERLKQALDAESK
IVQLKTVMHSLEEKISDIESENQVLRQQTLLNSPVKKVSQLPPIPVFPNLENGHHMDELN
KSNEPQSVTPVKKAGAESDGRLRRSNLERQHENVDALINCVSKDIGFSQGKPVAAFTIYK
CLLHWKSFEAERTSVFDRLIQMIGSAIENEENNGHMAYWLSNTSTLLFLLQKSLKAAGSS
GATPSRKPTAATSLFGRMTMGFRSSPSSNNLAAAAALAVVRQVEAKYPALLFKQQLAAYV
EKIYGIIRDNLKKELSSLLALCIQAPRTSKGSVLRSGRSFGKDSASTHWQSIIDSLNTLL
STLKENFVPSVLIQKIYTQTFSYINVQLFNSLLLRRECCTFSNGEYVKAGLAELELWCCQ
AKEEFAGSSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDDN
YNTRSVAPNVISSMRVLMTEDSNDAASSSFLLDDNSSIPFSVDDLSNSLQEKDFLEVKPA
EELLENPAFQFLHE
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacaactagtcttgtagttggatctcttgtctgggtggaagatcctgatgat
gcttggatagatggtgaagtcgtggaggttaaaggtgaagatattaaagtcctatgcact
tcagggaagacggttgttgttaaagcttcaaatgtctatcctaaagatgctgaggcccca
ccttgtggagttgatgatatgacaaagctggcttatttgcatgaaccgggtgtgctccag
aatttacgatcaagatatgatatgaatgaaatatatacatatacaggaaatatattgatt
gctgtaaacccattcagaagactacctcatctttatgatagccatatgatggcacaatat
aagggggcagcctttggtgaattgagtccacatccctttgctgtagcagatgctgcatac
agattaatgatgaatgagggaattagccagtcgattttggtcagtggtgaaagtggggct
ggtaaaacagaaagcacaaaattgcttatgagatatcttgcttacatggggggtagagct
gctgctgagggaagaacagttgagcagcaagttctagagtccaaccctgttttagaagca
tttggtaatgcgaagactgttaggaacaacaactcaagtcgctttggtaagtttgtggag
attcaatttgattggagtggaaggatttcaggagctgcaatcagaacttatttgctagaa
agatcacgagtttgtcaagtgtctgatccagagagaaattatcactgtttctacatgctt
tgtgctgcaccaccagaggatattcagcggtttaaattaggaaacctgagaacgtttcac
tatctgaaccaatctaattgctatgagttggatggcgttgatgagtctaaggaatatgct
gcaacgaggagggcaatggatgttgttggaataagttctgatgagcaggatgccatattc
cgtgttgtggctgcaattcttcatcttgggaacattgaatttgccaaagggaaggaaata
gactcatcagtgcctaaagatgaaaaatcacgatttcatctgaggactgcagctgagctt
tttgagtgcgatgaaaagttactagaagattctctttgtaagcgcgtaatcgtaactcgt
gatgaaaccattacaaaatggctggacccagtatctgctgcgcttagtagagatgctttg
gctaaaattgtgtactcgaggttgtttgactggattgtggataagatcaatagttcaatt
ggtcaagatcctgactcaaagtacttaattggggtgctggatatttatggatttgagagt
ttcaagactaacagttttgagcaattctgcattaatttgacaaatgagaagttgcagcag
catttcaaccagcacgtcttcaaaatggagcaagaagagtatacaaaagaagaaattaat
tggagctacattgaatttgttgataatcaggatgttcttgacctcattgaaaagaaacca
ggtggcataattgctcttctagatgaggcttgcatgtttccaagatcaacccatgaaact
tttgctcagaagctgtaccagacgtttaaaaaccataagcggttcagcaagcccaaattg
tctcgtagtgatttcaccatttgccattatgctggtgatgtcacttatcaaactgagctg
ttcctggacaagaacaaagattatgttgtagctgaacatcaggcccttttgaatgcttca
aaatgttcctttgtttccggattatttccacctttagcagaggaatcttccaaatcgtca
aaattctcttcaataggttctcgatttaagcaacaactacaagctttacttgaaactctc
agttccactgagccacattacatacgttgtgtaaagcccaataatcttcttaagccatca
atatttgagaataaaaatgttctacaacaactacgatgtgggggggttatggaggctatc
aggattagctgtgctggatatcctactagaaaacaatttgatgaatttgtggaccgattt
ggtcttcttgcacctgaagttttggatggaagttctgatgaggttgctgcgtgcaaaaag
cttctagagaaggtcgggcttcaaggctatcagattggtaagacaaaggtttttcttagg
gctggtcagatggctgatctggatacccgtaggattgaagtcttaggaagatctgctagc
attattcagaggaaagttcgttcttatttagctcgcagaagtttcattgtgcttcgccga
tctgcattacagattcaatctgtctgcagagggcaacttgctcgcaaagtgtttgaaggc
atgagaagagaagcagccagtttaaggattcagagaggtttgcgcatgcatcttgctagg
aaagcttataaagaattgttctcgtctgctgtttccattcagacaggcatgcgggggatg
gctgctcgcaatgagttacgcttcagaaggcagaccagagcagctattataattcagagc
caatgtcgcaagttcttggcccggttgcattatctgaagttgaagaaagcagcaattgca
acgcaatgtgcatggagaggaagagtagctcgtaaagaactgcggaagcttaagatggct
gctagggagacgggagctctgcaagctgcaaagaacaaactggaaaagcaagttgaggaa
ctgacatggagattacaactggagaaacgaatgagggttgacctggaagaagctaaaaca
caagaaaatgcaaaactgcagtctgctttgcaagacatacaacttcagtttaaagagacc
aaagaattgcttgccaaggaacgtgaggctgccaaanaggcagctgaggtagtccctata
attcaggaggtttcggtggtggaccctgtgatgttggagaagcttacaaatgagaatgaa
aaactgaaggcattagtgagttcgttggaaaagaaaattgatgaaacagagaaaaagttt
gaagagacaaacaaaataagtgaagaaaggttgaaacaagctttggatgccgaatcaaaa
atagttcagttgaagactgttatgcacagtcttgaagaaaagatttcagacattgaatct
gaaaaccaagttttgaggcagcaaaccctattaaattcgcctgttaagaaggtttcacag
cttccaccaattccagtctttccgaatttggaaaatggtcaccatatggatgaattgaac
aaatcaaatgaaccacagagtgtgactccagtgaagaaggctggtgcagaatctgatggc
aggttgcgaagatccaatcttgaacgtcaacatgagaatgttgatgcactgatcaattgc
gtttcaaaagacattgggttcagtcaagggaaacctgttgcagcatttaccatatataaa
tgtcttctccactggaaatcttttgaagcagaaaggaccagtgtgtttgatcgtcttatt
cagatgattggttctgcaattgagaatgaagaaaacaatggtcatatggcatattggttg
tccaacacatcaacgttactgtttttgctccaaaaaagtcttaaagctgctggttcaagt
ggtgcaactccaagtcggaagcctactgctgcaacctctctgtttggaaggatgacaatg
ggtttccgctcatctccttcttccaacaatcttgctgctgctgctgcacttgcagtagtt
cgccaagtagaggccaaatatcctgctttacttttcaagcagcaacttgcagcatatgtg
gaaaaaatctatggaatcattagggacaacttgaagaaagagttatcatctttgcttgct
ctatgcatccaggctccgagaacatctaagggaagtgtactacgatctgggcggtctttt
ggcaaagattctgcttcaactcactggcaaagcattattgatagcctcaacaccctccta
agtactttgaaagaaaattttgtgccttctgttcttatccagaagatttatactcaaacg
ttttcatacatcaatgtacaattgtttaatagcctcctcctacgccgtgagtgttgtaca
tttagcaatggagaatatgtcaaggctgggttagccgagttagagctctggtgctgccaa
gcaaaagaagagttcgctgggtcatcgtgggatgaacttaagcacataaggcaggctgtt
ggattcttggttatacatcagaagtacagaatttcgtatgatgaaattacaaatgatctc
tgccctattcttagtgtacagcagttatacagaatatgtacgttgtactgggatgacaac
tacaatactcgaagtgttgctccaaatgttatttccagcatgagggtactaatgacagag
gattccaatgatgctgctagcagttcctttttattggacgacaattccagcatccccttc
tctgtcgatgacctttccaattcgcttcaagagaaagacttcttggaagtcaaaccagca
gaggaacttcttgagaatccagccttccaatttttacacgagtaa
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integrated database retrieval system
