KEGG   Gossypium hirsutum (upland cotton): 107924358
Entry
107924358         CDS       T04793                                 
Name
(RefSeq) protein SUPPRESSOR OF PHYA-105 1 isoform X1
  KO
K16240  protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    107924358
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107924358
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    107924358
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_RIG_2nd Beta-prop_EIPR1 EIF3I ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_CAF1B_HIR1 Beta-prop_HPS5 Beta-prop_EML Pkinase Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N WD40_like
Other DBs
NCBI-GeneID: 107924358
NCBI-ProteinID: XP_016710251
UniProt: A0A1U8L6M0
LinkDB
Position
D11:complement(8806440..8813540)
AA seq 987 aa
MERDGQEMAANELPETAEFKRKDLIFPLKSEGHILMESPMNGLSRFAPQYPGTSMNETET
ETETGIIVEELTVENYKISTLSLAKNSNNLKQGQRERMYHNQRLEHEVLDDENANHVLLR
AKEQLARMSYENHKSKDIDQTTGGMALHLKATDDHLGISSNSLSVAAARLKMSSRPSFSQ
LFVKKGMKGKDIIRRDPHDQPCLLGIDRSTTDPCPNAISLREWLKLGSRKEDKVESLIIF
RQIVELVDSAHLQGVVLQDLRPSCFCLLPPNKVIYTGLSVKQGLESAVNNDLKRKRDLEQ
GMNASNCRRGTKKLKHNENMQPPGYKTEFASPHGSKTKMQKNIGFHTSIKQHSTSFLNQP
PTFHYATPSVVQSISAAIQMEERWYACPGELNGRSLTFSSNIYSLGVFLFELLCCFESME
QHSAMMSDLSQRILPPNFLSESPKESAFCLWLLHPGPLSRPTTREILQSDLFCGSQEKIS
GNNLSESPGNDVAISEILLHFLTKLEEQKQKRASKLMEEIRFLEEDIKEAKRRQALRTSS
VFPQIQNGFPDAGKKWMHSENPGTSVAHCVPNLKSDVNDGWLSKNIWQLEHAYFSMRSQI
HSSEIAAAAISDKDLLKKRGKLSESQSENGKLRMNQKSIDPLGSFFKGLCKFACYSKFEA
CGTIRNRDLLNSANVICTLSFDRNEDYIATAGISKRIKIFEFDAFMNDSTDIHYPIVEMS
NKSKISCVCWNNYVKNYLASTDYDGVVQTWDAGTGQGLCQYNEHQKRAWSVDFSQADPTK
FASGSDDCSVKLWSINEQKSSLGTLWSPANVCCVQFSSFSPHLLAFGSADYKVYCYDLRH
SRIPLCTLAAHEKAVSYVKFLDSNTLLSASTDNTLKSWDLKKTCSDGSTTNTCCLTFSGH
KNEKNFVGLTVLDGYIACGSETNEVYCYYRSLPMPITSYKFGSVDPISGHQTGDENGQFV
SSVCWRQKSNMLVAANSTGSIELLKLV
NT seq 2964 nt   +upstreamnt  +downstreamnt
atggaacgagatgggcaagaaatggcggccaatgaattaccagagactgctgaattcaaa
agaaaggacttaatttttcctttgaaatcagaaggtcacattttgatggaatcgccaatg
aatggtttgagtcgctttgcacctcaatatcctgggacttctatgaatgagaccgagacc
gagaccgagactggtataatagtcgaagaattgactgtggaaaactataagatctcaact
ttaagtttagccaagaactcgaacaacttaaagcagggtcagagggaacgaatgtatcat
aatcaaaggctggaacacgaggttttagatgatgaaaacgcaaaccatgtcttgttgaga
gcaaaagagcaacttgcaagaatgtcttatgagaaccataagagcaaggatattgaccag
acgacagggggaatggctctgcatttgaaggctactgatgaccacttgggtatctcgagc
aattcattgtcagttgcagctgctcggttgaaaatgtcatctaggcctagcttttctcag
ttatttgtcaagaaaggtatgaaaggaaaggacattatcagaagagacccacatgaccag
ccttgtttacttgggattgataggtctactactgacccttgccccaatgcaattagtttg
agggaatggctaaaactagggagtcgaaaagaggataaagttgaaagcctgattatattc
aggcagattgtggagctggtggattcagcgcatttgcaaggagttgtcttgcaagactta
cgaccatcctgtttctgtttattaccacctaataaggtaatctatactggtctgtctgtc
aagcaaggactagagtctgcagtaaataatgatttgaagaggaaaagggacctggaacaa
ggtatgaatgcttccaattgcagacgaggtacaaagaagctaaagcacaatgagaacatg
caacctcctggatacaaaacagaattcgcctctcctcatggatccaagaccaagatgcaa
aaaaatattggctttcatacatctattaagcaacattctacctcatttctcaaccagcct
ccaactttccactatgctacaccatctgttgtgcagtctatttctgcagctatacaaatg
gaggagaggtggtatgcttgccccggggagctcaatggaagaagccttacattttcatca
aatatatatagccttggggttttcctttttgagttgctatgttgttttgaatcaatggag
cagcattctgcaatgatgtcagacttgagccagcggattcttccaccaaatttcctttca
gaaagtcccaaggaatctgccttttgtctttggcttcttcatcctggacctctctctcgt
ccaacaactagggaaatcttgcagtctgatttattttgtggatcccaagaaaagattagc
gggaataatttatcagaatctcctggtaatgatgttgctatatcagagatattactacat
tttctaactaaactagaagaacaaaagcagaagcgtgcctccaaattgatggaagagatt
aggttcttagaagaagatattaaggaagctaagagaaggcaagcattaaggacatcctca
gttttccctcaaatacaaaatggatttcctgatgcaggaaaaaagtggatgcattccgaa
aatcctggaacttcagttgctcattgtgtaccaaatttgaagtcagatgtaaatgatgga
tggttgtcgaaaaatatctggcaactcgagcatgcctacttctccatgagatcccaaatc
cactcttctgaaattgctgctgcagcaatctctgacaaagacttactgaagaaacgaggc
aagttgtctgagtcacaaagtgagaatggaaagctgagaatgaatcagaaatctattgat
ccccttgggagctttttcaaaggtttgtgcaagtttgcttgctatagcaagtttgaagcc
tgtggaacaataagaaatagagaccttctaaactctgcaaatgtgatatgcactcttagt
tttgaccgtaatgaggattatattgctactgctggcatatcaaagagaatcaagattttc
gagttcgatgcattcatgaatgattctactgatatccactatcccattgttgagatgtca
aacaagtcaaagattagctgtgtgtgctggaacaactacgtaaagaattatttggcttca
actgattatgatggcgttgtccagacatgggatgcgggaactggtcaaggactctgtcaa
tacaatgaacaccaaaagagggcgtggtctgtcgacttttctcaagctgacccaacaaag
tttgccagtggaagtgatgactgctctgtgaagctttggagcattaacgagcagaaaagt
tcgcttggaaccttgtggagccctgcaaatgtctgctgtgttcagttctctagtttctct
ccgcatctgttggcatttggatcggctgactacaaagtctattgctacgatctccgtcat
tctagaatccccttgtgcacactggctgcccatgaaaaagctgttagctatgtcaaattc
ttggattccaacacccttctctctgcatccactgacaacaccctgaagtcatgggatctc
aagaaaacttgctcggatggatcgaccaccaatacttgctgcttaacctttagtggccat
aaaaatgagaagaactttgtgggtttaactgtcttggatggatatatagcatgtggttca
gaaacgaatgaggtctattgttattatagatctctgccaatgcccatcacttcgtataag
ttcgggtctgttgatcctatttctgggcatcaaaccggtgatgaaaatgggcagttcgtt
tcaagtgtctgttggagacaaaagtcaaacatgcttgttgctgccaactcaactggaagt
atagaattactgaaactagtgtga

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