KEGG   Gossypium hirsutum (upland cotton): 107924380
Entry
107924380         CDS       T04793                                 
Name
(RefSeq) denticleless protein homolog A-like
  KO
K11790  denticleless
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107924380
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     107924380
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML EIF3I Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd MIOS_WD40 Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_SCAP WD_LRWD1 Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_IP5PC_F Beta-prop_Nup120_160 Beta-prop_BBS7 NBCH_WD40
Other DBs
NCBI-GeneID: 107924380
NCBI-ProteinID: XP_016710291
UniProt: A0A1U8L6R8
LinkDB
Position
A11:6512772..6522528
AA seq 579 aa
MEAPCHAGGSTICFSIVWLAMALCGAPLRVFSRIRRRETAGKLRKKKFEISRQLKPWPNI
PSRKKRRRNANRFVNFPIFFHGIRSRELSSFRVRKRAWIDELASDFTEIGAIENNVLETP
PLAVSFCKASKNSHIFAVPDEAGYVNLFDSRRELSSAASYHENAEKARIDDWLAHQNAIF
DVCWIKEDTHILTASGDQTIKVWDAQDKKCAGVLMGHTGSVKCLSSHPTNSDLVLSGSRD
GSFAIWDLRCKSNSKSRCDEVCHPSTSMVKGAHLSSQARRGRHGKAAAASITSVIYLKDE
ISIATSGAADSVVKFWDTRNLKSNVTQACPHPESSTQKGISSLSQDLKGVFLTACCMDNR
IYLYNVLQLDKGPIHTFSGCQIESFYVKATISPDGDHVLSGSSDGDAYIWKVNKPLAEPI
ILKGHKGEVTAVDWCLSEVGKIATSADDFTVRLWNIEPRYCSSTRLPSSVRRRVMAVPSA
ESSKLLVNETVEPMDQIKQPGTCSSYSSDEALQIYSSSPATASLLRTPEAQKKKFPSTSD
SNETFEKTPEAAMRSPTSVLNPPSSLKRKTIRDYFLAIQ
NT seq 1740 nt   +upstreamnt  +downstreamnt
atggaggcaccctgccacgctggagggtccacaatttgcttttctattgtatggctggct
atggcattgtgtggggcccccttaagggtcttttcgagaattcgtaggcgagaaaccgcc
ggtaaactgcgaaaaaagaaatttgaaatttcccgccagctcaaaccatggccaaacatt
ccctcgcgcaaaaaaagaagaagaaatgcgaaccgattcgtcaactttccaatatttttc
cacggtatcagatccagagaactcagtagctttagagttagaaaacgagcatggattgac
gaattagcttcggattttactgaaatcggagcgattgaaaacaatgttttagaaacgcct
cctttggccgtctccttttgtaaggcaagtaaaaattcccatattttcgctgtacctgat
gaggctggatatgtaaacctgtttgattctcggcgggagctttcttctgctgcatcttac
catgaaaatgcagaaaaagcaagaatcgatgattggctagcacatcaaaatgccatattt
gatgtatgttggatcaaggaagatacccacattttaacagcttcaggggatcaaactata
aaagtatgggatgctcaggataagaaatgcgctggagtcttgatggggcatacgggaagt
gttaaatgtttgagttctcatccaaccaattctgatcttgttctctctgggtcgagagat
gggtcctttgccatttgggatctaagatgcaagagtaactcgaaaagtagatgtgatgaa
gtctgccatccatcaacctccatggttaaaggagctcatctttcatctcaagcaaggcgg
gggaggcatggcaaggctgctgctgccagcattacatcagttatttatctcaaagatgag
atttccattgccacatctggagcagcagacagtgttgtgaagttctgggatacaagaaat
ctgaaatctaatgttactcaggcatgtccacatccagagtcttcaacacaaaagggtata
tctagcttgtcccaggatttgaaaggagtatttctcacagcatgttgcatggataacagg
atatatttgtataatgtacttcagcttgataagggcccgattcacactttctctggatgc
caaatagaatctttttatgtaaaggctacaatcagtccagatggagatcacgtattaagt
ggttcaagtgatggagatgcttacatatggaaggtaaacaagcctctagcggagcctatc
atcttgaaaggtcataaaggagaagttacggcagtagattggtgcctatctgaggttggg
aagatagcaacctctgcagatgatttcacggttcgactatggaacattgaacccagatac
tgctcgagcacaagattgccatcttccgtccgaagaagagtaatggcagttccaagcgca
gaaagtagtaagctattggtgaatgagactgtagaaccaatggatcaaataaagcaacct
ggtacttgtagttcatattcttcagatgaagcactccaaatttactcatctagtcctgcc
actgcatctttacttagaactcctgaagcccagaagaaaaagttcccatcaacttcagac
tcaaatgaaacctttgagaaaacacctgaagccgcaatgaggagtccgacttcggtgctg
aatcctccttcctcgttgaaacggaaaaccatccgcgattactttctagccattcaatga

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