Gossypium hirsutum (upland cotton): 107924403
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Entry
107924403 CDS
T04793
Name
(RefSeq) poly [ADP-ribose] polymerase 1-like
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107924403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ghi03032
]
107924403
03036 Chromosome and associated proteins [BR:
ghi03036
]
107924403
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107924403
Enzymes [BR:
ghi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
107924403
DNA replication proteins [BR:
ghi03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
107924403
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
107924403
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
107924403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
BRCT_3
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
107924403
NCBI-ProteinID:
XP_040962048
LinkDB
All DBs
Position
D11:13154597..13163162
Genome browser
AA seq
992 aa
AA seq
DB search
MANPPKPWKAEYAKSARSSCKTCKSVINKEVFRLGKMVPATQFDGFMPMWNHADCILRKA
NQIKSTDDVEGIESLRWEDQQKIRNYVESGEPSNAKTITPQAMEYAIEVSLASRATCKGC
SQKIMKGEVRISSKPKGQGSKGLVWNHAKCFLDLSPTTEVEKLPGWEHIPSSDQASISAL
VKKVPAAKTGKGTDVPKEQQPQSTSTAGAKRKKDVGDDQKSKITKLEGEVSARGAGRTKN
ANDLTDKNPKDSDLETKLEAQAKELWALKDELKKHVTTAELREMLEANGQDATGSELDLR
DRCADGMMFGALGKCPMCSGCLRFSGGKYRCHGYISAWSKCSYSTCEPERLKGKWKVPDE
TNNEFLSKWFKSQKIKKPARILPPPSASSSQAANGQSQTSNAESLANLKVSIVGLPKESL
EEWKGKIKEAGGMVHAKIKTDTNCLVVSGDSEGHDAERRKARRMRLPIVREDYLVDCFKK
QKKLPFDLYKVEAIGEASSMVTVKVKGRSAVHEASGLQDSCHILEDGGSIYNTTLNLSDL
STGVNSYYILQIIQEDKGSGCYVFRKWGRVGNEKIGRSKLEEMPKSDAISEFKRLFLEKT
GNSWEAWEKKQNFQKQPGRFFPLDIDYGVNKQVSEKKHTDADSQLPPPLLELVKMLFNVE
TYRAAMMEFEINMSEMPLGKLSKSNIQKGFEALTEIQNLLNSDASDPSLKESFIIDASNR
FFTVIPSIHPHVIRDEDDFKAKVKMLEALQDIEIASRLVGFDVDSDDSLDEKYKKLHCDI
TPLPHDSEDFQLIEKYLLTTHAPTHTDWKLELEEVFSLEREGEFDKFAPYREKLSNRMLL
WHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGVYFADLVSKSAQYCFTDRKNPVGLML
LSEVALGEVYELTKAKYIEKLPKGKHSTKGLGKKVPKKSDFVKWKDDIIVPCGKPVPSSV
KESELMYNEYIVYNTSQVKMQFLLKVRFHHKR
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacccaccgaagccatggaaagcggagtacgccaagtccgctcgatcatcttgc
aaaacttgcaagagtgttatcaacaaggaggtcttcaggctaggcaaaatggtcccagcc
acccagttcgatggcttcatgcccatgtggaaccatgcagattgtatactaaggaaagca
aatcagataaagtctactgatgatgttgaaggcatagaatcccttcgatgggaggaccaa
caaaaaatcaggaactacgtggaatcaggtgaaccttcaaatgcaaaaactatcactcct
caagccatggaatatgctattgaagtttcactagcttctcgagccacttgcaagggttgc
tcccagaagattatgaaaggagaggttcgaatatcttccaagcctaagggtcaaggatct
aagggattggtgtggaaccatgccaagtgttttttggatttgtctccaactactgaagtg
gaaaagttgcctggatgggaacacattccatcttctgatcaggcatctatttctgcattg
gttaagaaggttcctgctgctaagacaggcaaaggaactgatgtaccaaaggagcaacag
ccacaatcaacctccacagctggtgcaaaacgtaagaaggatgttggtgatgatcaaaaa
tcaaaaatcaccaagttggaaggagaagtgtctgcacgtggggctgggcgtacaaagaat
gccaatgacttgacggacaaaaacccaaaagattctgatctggaaacgaaactggaggcc
caggctaaagaactgtgggctttgaaggatgagttgaagaaacatgttacaacagcagaa
ctgcgtgaaatgcttgaggccaatggccaagatgcaacaggatcagaacttgatttgcgt
gaccgctgtgctgatgggatgatgtttggagcacttggtaaatgcccaatgtgttctggt
tgtcttcgcttttctggaggcaaatatcgctgccatggctacatttcagcatggagcaag
tgttcttactctacttgtgaacctgaacgtcttaaagggaaatggaaagtaccagatgaa
acaaataatgaatttcttagcaagtggtttaaatcacaaaaaattaaaaaaccagctcgc
atcctgcctccaccttctgcttcttcaagtcaagctgctaatggccaatctcaaacttca
aatgctgaaagcttggcaaatttgaaagtttccattgttggattgcctaaggagtctttg
gaagagtggaagggaaaaatcaaggaagcaggtggtatggttcatgccaagatcaagact
gatacaaattgcttggttgtgagtggggactcggagggtcatgatgctgaaaggaggaag
gcaaggagaatgagattgccaattgttagggaggactatcttgttgattgttttaaaaaa
cagaagaagcttccttttgatttgtacaaagttgaagccatcggtgaggcctctagcatg
gtcactgtcaaagtaaaaggacgaagtgctgtgcatgaagcctctggtctgcaagattca
tgtcatatacttgaggacggtggaagtatatataacacaactctgaacttgtctgactta
tcaaccggtgttaacagttactacatcctccaaataatccaagaagataaagggtcaggt
tgttatgtattccgtaaatggggtcgtgttgggaatgaaaaaattggcagaagcaaattg
gaagagatgccaaaatcagatgcaatctctgaattcaaacgtttatttctcgagaaaact
gggaactcatgggaggcatgggaaaagaaacaaaatttccagaaacagcctggcagattt
ttcccattggatattgactatggggttaacaaacaggtgtcagaaaagaagcacactgat
gcagatagtcaacttcctcctcccttacttgaattggtgaagatgctttttaatgtggaa
acatacagggccgcaatgatggagtttgagattaatatgtcagaaatgccccttggaaag
ctgagcaaaagcaatattcagaaaggttttgaggcattaacagagatacaaaatctattg
aatagtgatgcttctgatccttctctcaaagaaagctttattattgatgccagcaataga
ttttttactgttattccttctatccatccacatgtcataagggatgaagatgattttaag
gcaaaggtgaaaatgttggaagctcttcaagacattgaaatagcctcaagactagtaggt
tttgatgttgacagtgatgactcccttgatgaaaaatataagaaactccattgtgatatt
actccccttcctcatgatagtgaagattttcagttgattgagaaatatctccttaccact
catgcccctactcatactgattggaagcttgaattggaagaagtattctcacttgaaaga
gaaggagaatttgataagtttgctccttacagagaaaagcttagtaacagaatgcttctc
tggcatggttctcggttgacaaattttgtagggatacttagccagggactaagaatagct
cctccagaagctccagcgactggctatatgtttggcaagggggtctattttgctgatttg
gtcagtaagagtgctcagtattgctttactgataggaaaaatcctgtgggcctcatgctt
ctcagtgaagttgctttaggggaggtctatgaactaacaaaggccaagtatatagaaaaa
ctaccaaaaggaaagcactctaccaaagggctcggaaagaaagtacctaagaagtctgac
tttgtaaagtggaaggatgacattattgttccttgtggcaaaccggttccatccagtgtg
aaggaatctgagctgatgtataatgaatacattgtttataacacttctcaagttaagatg
cagttcctgttgaaagtgaggtttcatcacaagaggtga
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