KEGG   Gossypium hirsutum (upland cotton): 107924453
Entry
107924453         CDS       T04793                                 
Name
(RefSeq) RRP12-like protein isoform X1
  KO
K14794  ribosomal RNA-processing protein 12
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ghi03009]
    107924453
Ribosome biogenesis [BR:ghi03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    107924453
  Pre-60S particles
   Other pre-60S particles
    107924453
SSDB
Motif
Pfam: HEAT_RRP12_N RRP12_HEAT HEAT_GCN1 HEAT_Maestro RIX1
Other DBs
NCBI-GeneID: 107924453
NCBI-ProteinID: XP_016710400
UniProt: A0A1U8L723
LinkDB
Position
A11:122010942..122021209
AA seq 1179 aa
MKKKQIPNSPLDDKETPKEIDNENEIPLEDGSDICQQLMDRYSKSSAPQHRHLIATAAAM
RSILSSESLPLSPPAYFAASISALDDDSAATLDSTAIGALLTFLSLVVPAVPKGGIASGK
AKEAVEVVVRVLGKEGLGVASLRSGVKCLGLLLVGFSDLQDWHSVQFGLESLLGFAIDKR
PKVRRCAQEYLEKFFKSLQSSDVMKEASKLVLSLLKSHMPVALTLNTIKSADDSKDETLS
NPEHLEVLHMLNVLKLTVPYLSATIRLKILSELCKLTSSEFSILTRNIHKTIEVFFGNSN
AEAIIPATENIIVSLSSYVSGEKNPVDTLISAATLLKCAVDKLYAVDSNSWTKHTPFVYD
SLAALLSSEASVASHASDIMKELITDHIDLKSLSSDNNGLGSEEADALKSICSIFENTLS
SSDGIPNEHVLAVLTVLFQKLGESSYIFMKGIVHKLADLMTRTSGNTSNTNHLQNCVGSA
VTVIGPERMLTLLPITLSVDNLMHSNMWLVPILKDYVVGASLSYYMEHIVPLAKSFQEAS
CKVKKSVIRQDLQAHSHSLWGLLPAFCRYPIDTHKRFKALAELLIDILKEDSLMHENIAV
AIQILVNQNKNILRSGEDADESNNTVMGDSKLELRIPDTYSKKTATKNIKALSSCAPEIL
QALTDVFIHSIPAKRLYLKDAIGCLASITDSSITKRIFVLLVEKLQSIDGEGEFVKQADN
ADEVVEKEKNTNTMGKDASRCIIMELASSLISGAEEDLIDFIYVLIKQTFQETNEIGHHE
AYYALSRILEEHAWFCSSKSEELIDLLLGLKSPADTPSLRNRLDCFNTLMVHTLKVSSLE
ENTKPFLILNEIIVTLKDGKEETRKTTYDILLKMSSTLRKSSDLESDPPYHKLISMIMGY
LSGSSPHIKSGAVAALSVLVYDDPEICISVPDLVSSILSLLQTKAVEVIKAVLGFVKVLV
STLQAKDLQNFLSDIINGVLQWSSISRNHFRSKVTIILEILTRKCGIAAVQSVAPEKHKG
FLNTVIENRRGKTTSEETDVNDADKVPVGSSTEGSRKRRDKRFGAFKSKNDMIEHRKRKR
DKRDGGSKHAKSSEHVGHGGGMKMAKRAKHLGNSMKDHSEGNGKKKNFDKGSSTGRGQKR
KINQATTSQKGEAAGDKRHSFKVQTRPKKFRGVNKKGDK
NT seq 3540 nt   +upstreamnt  +downstreamnt
atgaagaaaaaacaaatcccaaattccccgttagacgataaagaaaccccgaaggaaatc
gacaacgaaaacgaaatccctttggaagatgggtccgatatctgtcagcaactcatggat
cgttattcaaaatcatcagccccgcagcatcgccacctaatcgccactgctgccgcgatg
cgttccatcctttcatctgagtcgcttcctttatctccgccggcttactttgctgcatcc
atttctgccctcgatgatgattcagcagccacccttgattcgacggctatcggtgcgctt
ctgacgttcttgtcgcttgtggttccggcggtgccgaaaggagggattgccagtgggaag
gcaaaggaggcggtggaagttgtggtgagagtattggggaaggagggattgggagttgcg
agtttgagaagtggggtgaagtgtttggggttgttgcttgtcgggttttctgatttgcag
gattggcactcggttcagtttggtctagagtcattgcttggattcgccattgataaacga
cccaaggttcggagatgtgctcaagaatatcttgagaagttttttaagtctttacagtcc
tcagatgttatgaaggaggcaagtaaattggtactttccttgctaaaaagccatatgcct
gttgcacttaccttaaacaccataaaaagtgcagatgattctaaggatgaaacattatcg
aatcctgaacatttggaggtccttcatatgttaaatgtgctgaagcttactgttccatat
ctctctgccacaatccgtttgaaaattttatcagaactatgtaaacttactagttctgag
ttctctattcttacacggaacattcataaaaccattgaagtattttttgggaactcaaat
gctgaagcgattataccagcgacggagaacattatagtttctctttcttcttatgtctct
ggggagaagaatcctgttgacactctcatatctgccgcaactttgttaaaatgtgctgta
gataaactttatgctgtagactcaaactcctggacgaagcacactccttttgtttatgat
tcattagcagctcttttgtcttctgaggctagcgtggcatcacatgcatcagatattatg
aaggagttgattaccgaccatatagatctgaagtctctttcatctgataacaatggcctt
ggtagtgaggaagcagatgcattaaaatctatatgttcaatctttgagaataccctaagt
tcaagtgatggaattccaaacgagcatgttttggctgtcttgactgttttgtttcagaaa
ctcggagaatcctcatatatatttatgaagggcattgtacataaacttgctgacttaatg
actcgcactagtgggaacacatctaacacaaaccatcttcagaattgtgtaggatcagca
gttactgttatcgggccagagaggatgctgactcttttgcctataaccctttctgttgat
aacttaatgcattcaaacatgtggttggtacccatattgaaagactatgtcgttggagca
tctcttagctattatatggagcatatagtgccacttgcaaaatcctttcaggaagcaagt
tgtaaagtaaaaaagtctgtaattcgtcaagatctgcaggctcacagtcatagcctctgg
ggattactacctgccttttgtcgttatcctattgatacacacaagaggtttaaagctttg
gctgaacttttaattgatattcttaaggaggactcgcttatgcatgaaaatattgctgtt
gccatacagattcttgtcaaccaaaacaaaaatatacttagatctggagaggatgctgat
gaatcaaacaatactgtaatgggagactctaaattagagctcagaattccagacacttat
tcaaagaaaactgcaaccaaaaatatcaaggcattatcatcatgtgctccggagattctt
caggctctaactgatgtatttattcattccattccagcaaagcgtttatatcttaaggat
gccattggatgcttggcttcaataacagactcttctattaccaaaaggatttttgtgtta
ttggttgagaagctgcagtccattgatggtgaaggtgaatttgtaaagcaagctgataat
gcagatgaggtggtggaaaaagaaaaaaacactaatactatgggtaaagatgcaagcagg
tgtatcataatggagctggcatcttctcttatttcaggggcagaggaggaccttattgat
tttatctatgtcttaataaagcaaactttccaggaaacaaatgagatcggtcatcatgaa
gcatattatgctttaagcagaattttggaggagcatgcttggttttgttcttctaaatcg
gaggagttgattgatctattacttggcctaaaatctccagctgatactccatctcttaga
aaccggcttgattgcttcaacacgctaatggttcataccttgaaggtgagctcattggag
gaaaatacgaagccattccttattcttaatgagattatagtcacattgaaggatggaaag
gaagaaacaaggaaaacaacttacgatatattactaaagatgagttctaccttaagaaag
tcgtcagatctcgaatctgatccaccctatcacaaactgattagcatgataatgggatat
ctttctggttcatcacctcacattaagagtggagcagtggctgccctgtctgttctcgtg
tatgatgatcctgagatatgtatctcagtgcctgatcttgtttcttctattttatccttg
ttgcaaaccaaagctgtggaagttataaaagctgttttgggttttgtaaaagtcttggtt
tccaccttgcaagctaaagacctgcagaattttctttccgatattatcaatggagttcta
cagtggtcatctatctcgagaaatcatttcagatcaaaggtcactataatactggaaatt
ttgacaagaaagtgtggtattgctgcagttcaatctgttgctccggaaaagcacaagggt
tttctgaataccgttatagagaaccgacgtggcaaaacgacttctgaagaaactgacgtc
aatgatgcagacaaagtacccgtgggttcatcaaccgaagggtctcgaaagaggagagat
aagcgattcggtgcttttaaaagtaaaaacgacatgatcgaacaccgaaagagaaaaagg
gacaaaagggatggtggcagcaagcacgccaaatcaagtgaacatgttggccatggtggt
ggaatgaaaatggctaaaagagctaagcacttaggaaattcaatgaaggatcattcagaa
ggaaatggtaaaaagaagaatttcgacaaagggtccagcaccggcagaggtcagaagaga
aagataaatcaggcaactacgagccaaaagggtgaggcagctggtgataaacgacattct
ttcaaggtacaaactcgacccaagaaatttagaggggtaaataagaaaggtgacaagtaa

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