Gossypium hirsutum (upland cotton): 107924480
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Entry
107924480 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4 isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107924480
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107924480
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107924480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-rbx1
Prok-RING_4
Zn_ribbon_6
Rtf2
zf-RING_4
zf-RING_10
zf-Nse
zf-ANAPC11
TerY_C
zf-RING_11
RING_XB3-XBAT31
TRAF3_RING
zf-RING_6
Sina_RING
Zn_ribbon_RlmA
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
107924480
NCBI-ProteinID:
XP_016710438
UniProt:
A0A1U8LAN3
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All DBs
Position
A11:17016284..17020434
Genome browser
AA seq
209 aa
AA seq
DB search
MSTLEIRGPSLRGYRRRKAVLDLNAPPSEIREQEGTSQQAGYEDQTNQSVQSGPPATIDV
EAIDDDVIESSARAFAEAQNNSRRSRGRTVVDVDSAHISALPGWSARSSNNNQNMHRRLP
PSSSIINLEISPQSIQVEEITKPQPPPKEPTFNCPICMGPLTEEMSTRCGHIFCKACIKA
AITTQAKCPTCRKRVTVKELIRVFLPSAS
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgagcactcttgagataagggggccttctcttaggggatatcgaaggagaaaggcagtg
cttgatctgaatgctccacccagtgaaatcagggagcaggagggtacatctcaacaggct
gggtatgaggatcaaacgaatcaatctgtacagtctggtccacctgcaaccattgatgtt
gaggctattgatgatgatgtaattgaatcttctgctagagcttttgcagaggctcagaac
aattctaggaggagccgtggaaggactgtggttgatgttgattcagctcacatttctgcc
cttccaggctggtcagcgaggtcaagtaataacaatcagaatatgcacagaagacttcct
ccgagctcaagcattattaatttggaaatctcgccacagtcaattcaggttgaggaaatc
acaaagccacagccacctccaaaggaaccaaccttcaattgtccaatttgcatgggtcca
ttaacagaggagatgtcaacaagatgtgggcatattttctgcaaggcatgcattaaagct
gcaataactacacaggcaaaatgcccaacttgcaggaaaagagtcacagtgaaggaacta
attagggtcttcctgccatcggccagttga
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