Gossypium hirsutum (upland cotton): 107924546
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Entry
107924546 CDS
T04793
Name
(RefSeq) long chain acyl-CoA synthetase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00061
Fatty acid biosynthesis
ghi00071
Fatty acid degradation
ghi01100
Metabolic pathways
ghi01212
Fatty acid metabolism
ghi04146
Peroxisome
Module
ghi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
107924546
00071 Fatty acid degradation
107924546
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107924546
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ghi01004
]
107924546
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107924546
Enzymes [BR:
ghi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
107924546
Lipid biosynthesis proteins [BR:
ghi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
107924546
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of breast milk
107924546
Exosomal proteins of breast cancer cells
107924546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
107924546
NCBI-ProteinID:
XP_040936449
LinkDB
All DBs
Position
A11:complement(2150304..2157051)
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AA seq
663 aa
AA seq
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MAEERNYIIKVEEGKAATDERPSIGPVYRSCFAENGFPAPIPGMESCWDIFRMSVEKYPN
HHMLGHRQIVDGKAGKYVWQTYKQVYDIVMKVGNSIRSCGVEEGGKCGIYGANCPEWIMT
MEACNAHGLSCVPLYDTLGADAVEFIICHAEVSIAFVEEKKIAELFKTFPNSTKYLRTII
SFGKVTPEQKAEAEKQGLAIFTWEEFLQLGENKQYDLPIKKKTDICTIMYTSGTTGDPKG
VLISNESIITLLAAVDCLLGRVNEELTMNDVYISYLPLAHIFDRVIEELFISHGASIGFW
RGDVKLLLEDIGELKPSVFCAVPRVLDRIYSGLQQKISEGGLLKKTLFNVAYSFKFYNMR
NGSKHAEASPFSDRIVFSQVKERLGGNLRIILSGAAPLSSHVEEFLRVVACCHVMQGYGL
TETCAGTFVSLPHELSMLGTVGPPVPNVDVRLESVPEMGYDALASTPRGEICLKGTTLFS
GYFKREDLTKEVMIDGWFHTGDIGEWQPNGSMKVIDRKKNIFKLSQGEYVAVENLENVYG
CVSDIESIWVYGNSFESYLVAVVNPNKQALERWAADNGVSGDFETICKDPKAKEYILGEL
TRTGKEKQLKGFEFIKAVHLDHVPFDMDRDLLTPTFKKKRPQLLKYYQSVIDDMYNSINK
PNA
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagaggaattatataataaaggtagaggaagggaaggccgccaccgatgaa
agaccgtcgatcggccccgtttatcgcagttgttttgccgagaatggtttccctgctccg
attcctggaatggagagttgttgggacatcttccgaatgtcagttgagaaatatcctaac
caccatatgctcggtcaccggcagattgtggatgggaaagctggaaaatatgtgtggcaa
acttacaaacaagtttacgacattgtaatgaaagtaggaaattccattcggagttgtggt
gttgaggagggaggaaaatgtggtatatatggtgccaattgcccagagtggataatgacc
atggaggcctgcaatgctcatggactctcttgtgttcctttatatgacactttaggtgct
gatgctgtggagtttatcatatgccatgcagaagtttcaattgcttttgtagaggaaaag
aagattgctgaactgtttaaaacatttccaaactcaacaaaatacttgagaacaattatt
agctttggaaaggtaacacctgagcagaaggcagaagctgagaagcagggtttggcaata
tttacttgggaagagtttttgcaactgggagaaaataaacaatatgatcttcctataaag
aagaaaactgatatctgcactataatgtatactagtggaacaactggtgatcccaaggga
gtattgatttcaaatgaaagtatcattactcttttagcagcggtggattgtctgctagga
cgtgtaaatgaagagttgactatgaatgatgtttatatttcttatcttcctcttgcacat
atctttgaccgggtgattgaggagttatttatttcacacggtgcctcaataggattctgg
cgtggggacgtgaaactattacttgaagatattggggagctaaagccaagtgtcttctgt
gctgttcctcgtgtgctggatagaatctattcaggtttacaacaaaagatttctgaggga
ggcttattgaaaaagacgttgtttaatgtggcatattcattcaaattctataacatgagg
aatggctccaaacatgcagaggcatctccattttctgacagaattgtattcagtcaggta
aaagaaagattgggagggaatttgaggattattctctctggagcagcacctctttcttct
cacgtggaagagttcctacgagtagtggcatgttgtcatgtgatgcaaggatatggtttg
acagagacttgtgcgggaacttttgtctcattaccacatgagttgtcaatgcttggtact
gtggggcctccagtaccaaatgtggatgtacgcctagaatctgttcctgaaatgggatat
gatgcccttgcaagcacaccacgaggtgaaatttgtctcaagggaacaacattgttctca
gggtatttcaaacgtgaagacctcaccaaggaggtcatgattgatgggtggtttcacaca
ggggatattggtgagtggcaaccaaatggaagtatgaaagttattgatcgaaagaagaac
atctttaagctttcacaaggggaatatgttgctgttgagaacctggagaatgtttatggt
tgtgtttctgatattgaatcgatatgggtttatgggaacagctttgagtcctaccttgtt
gcggttgttaacccaaataagcaagcacttgaacgctgggctgctgacaatggtgtaagt
ggtgactttgaaaccatctgtaaagatccaaaggccaaagagtacatacttggagagctt
acaaggactggcaaagagaaacagctgaaaggttttgaatttataaaagctgtccatctc
gaccatgtaccatttgacatggaccgcgaccttctcaccccaacatttaagaagaaaagg
cctcaattgctcaagtattatcagagtgtgatcgacgacatgtacaacagcataaacaag
ccaaatgcttga
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