Gossypium hirsutum (upland cotton): 107924715
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Entry
107924715 CDS
T04793
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107924715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107924715
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107924715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
107924715
NCBI-ProteinID:
XP_016710773
UniProt:
A0A1U8LC95
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All DBs
Position
A11:18809180..18817011
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AA seq
476 aa
AA seq
DB search
MSGNGKLFIGGISWDTNEERLKEYFSTFGEVVEAVIMKDRTTGRARGFGFVVFSDPAVAE
RVILEKHNIDGRMVEAKKAVPRDDQNIMSRSTSSTHGSPGPGRTKKIFVGGLASTVTESD
FKKYFDQFGNITDVVVMYDHNTQRPRGFGFITYDLEEAVEKVLLKNFHELNGKMVEVKRA
VPKELSPGPSRSPLSGYNYGLNRVNSFLNGYTQGYTPSSVGGYGLRMDGRFSPIAGGRSV
FPPFGSGYGMGMNFEPGLNPSFGNSANFTSNMNYGRGLSPYYIGNNNRFGSPIGCGGTTG
GNTSFFSSVTRNLWGNGGLNYNTNAGSSGAYMGSGSGSIGGSSIGNSGINWGSAISSQVG
GNNVSSNSANFAYGTGDNSFGLGTAGYGRNSGTNVAPTSSYVASNGGYDGAFADIYGGAS
VYGDTTWRSSTSEQDDSGSFGYVLGGAASDVSGKSSPGYVGGYSVNRRQSNRGIAT
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggaatggtaagctatttattggtgggatatcttgggacaccaatgaagagcgt
ctcaaggagtatttcagtacctttggtgaggtggtcgaggcagtgatcatgaaggatcgg
accacagggcgtgcccgtggttttggtttcgttgttttctctgacccagctgttgctgag
agagttatattggagaaacacaacatcgatggtaggatggtggaagcaaaaaaggcagtt
cctagggatgaccagaacattatgagtagaagcaccagtagcacccatggttcacctggc
ccgggtcgcacaaaaaagatttttgttggtggtttagcatctacagtcacagagagcgac
tttaagaagtactttgatcagtttggaaatatcacagatgttgtagtgatgtatgatcac
aacacccaaaggcctaggggttttggattcatcacttatgatttagaggaggcggtggag
aaagtgttgctaaaaaatttccatgaactgaatggtaaaatggttgaggttaaacgggca
gttcccaaagagttatctcctggccccagtcgtagtccccttagtggatataactatggt
ctgaatagagttaacagctttcttaatggctacactcagggatatactccaagtagtgtt
ggtggctatggacttaggatggatggtagatttagtccaattgctggtggtcgaagtgtg
tttcctcctttcggttctggttatggaatgggcatgaactttgagccagggttgaaccca
agttttggaaatagtgcaaactttactagtaatatgaactatgggcggggattgagccct
tactatattggcaataacaatagatttggtagtcctattggatgtggtgggactactgga
ggtaatacttcctttttcagctcagtgacccgtaatctttggggaaatggggggctcaat
tataacacaaatgctggtagttctggtgcatatatgggatctggaagtggtagtatagga
ggaagttccattggaaatagtggaattaattggggttctgcaatttctagtcaagttgga
gggaataatgtttctagcaatagtgcgaattttgcctatggaactggtgataatagcttt
gggttggggaccgcagggtatgggagaaacagtgggaccaatgtggcaccaacatcatca
tatgtagcatcaaatggtggttatgatggagcctttgcagatatttatggtggtgcttca
gtttatggggataccacttggagatcatcaacatctgagcaagatgattctggttccttt
gggtatgtacttggtggtgctgcttctgatgtttcgggtaaaagttctcctgggtatgtt
ggtggttatagcgttaataggagacaatcaaatagaggaatcgctacctaa
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