Gossypium hirsutum (upland cotton): 107924804
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Entry
107924804 CDS
T04793
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 20
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107924804
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107924804
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107924804
Peptidases and inhibitors [BR:
ghi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107924804
Ubiquitin system [BR:
ghi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107924804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
107924804
NCBI-ProteinID:
XP_016710889
UniProt:
A0A1U8LCK3
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All DBs
Position
A11:2629835..2633563
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AA seq
699 aa
AA seq
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MEVQTSFPQTLMTADLPPSESIVSQEHVDGFRRVLPLVPDSLSGSSSVSPMAVDSIGTEA
MENPIEEETAAGPSQPPVSSTESEPSKEPENCPQEEEEDERWTHGGHNSPYNYSRRDNEF
KSPGSGYSSWTHSWSKHWSPKETSRNEDKPTGVGAGLENLGNTCFINAVLQCFTHTVPFV
LGLRSLNHHEKPCDRDMESFCLLCVVRDHIELSLHSSGGVVSPTKIFDNLNYFSSFFQRY
QQEDAHEFLQCLLDRLESCCSKLKNDLSSIDDCLVKKVFGGRLVSRLCCCNCGHVSSTYE
PLNDLSLEIEDADSLLTALESFTKVEKIEDLQLNYRCENCKEQVSVEKQLMLDQAPSVAT
FHLKRFKTEGTYIEKIDKHVDFPLELDLQPYAVGNERNNEELRYQLFAVVKHSGFRPTSG
HYVCYIRSSPNMWHKMNDSRVTCVEEEAVLSQEAYILLYAKQGIPWFSTAIEVQKPSADP
GISDSSPKSVLDDIDFASNLEVEKSANCSANETKDVADRASTQFSCDSQFEVRVDEPCVV
ADGISGVPANESEFHVSKSIDPIDDDPMTDASIPPLRSINCSDEATNDCGSPIMPSRSPS
PDNCDRNISGCGPQTHLKEEKRGGVCRRAVNKTPEMDQGRIEAMRYAKKMPSARGAKLMA
LLSPQTGKMKKRMGSSPCKRVSPRTKHNQNLMHPVPVSR
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggaagtccaaacatcttttcctcaaaccctaatgacagccgatctacctccttcagaa
tctatcgtttctcaggagcatgttgatggattccgtcgagttttgccattggttcccgat
tctttgtctgggtcttcatctgtttctccaatggccgttgattctattggtactgaagcc
atggaaaatcccatcgaagaagaaaccgccgccggtccttcgcagccaccggtttcttct
actgaatctgagccgtctaaggaacctgaaaactgtccgcaagaggaagaagaagacgag
agatggactcacggtggccataattctccttacaactattctcgcagagacaacgaattc
aaatcccctggatctgggtattcgtcatggacccattcatggtcaaagcactggtctcct
aaagagacttctagaaacgaagataaaccgaccggtgtgggtgcagggctggaaaatttg
ggtaatacatgttttatcaatgccgtgttgcaatgttttacccacactgttccttttgtt
ttgggtcttcgatcattgaatcatcatgagaagccttgtgatcgtgatatggagagtttt
tgtttgctttgtgttgttcgagatcacattgagctttcactacattcatctggaggggtc
gtttcgcctaccaaaatttttgacaatttgaactatttttcatcatttttccaaagatat
cagcaggaagatgctcatgagttcctgcaatgcttgttagacagacttgaaagctgttgc
tcaaagctcaagaatgatttgtcctctattgatgattgcctagttaagaaggtttttggt
ggtcgtcttgttagcagactatgttgttgcaattgtggtcatgtttcaagcacttatgag
cctttgaatgatttgagtttggaaattgaagatgcggactctttgttgactgccttggaa
tctttcaccaaagtggaaaagatagaagatttgcaattgaattataggtgtgagaattgt
aaagaacaggtgtcggtagagaaacagctcatgctggatcaagctccttcagttgcaaca
ttccatttgaaaagatttaagactgaagggacctatattgagaagattgacaagcatgtt
gacttcccattggagctggatttgcagccttatgctgttggcaatgagagaaataatgag
gaactgaggtatcaactatttgcagttgtaaaacattctggattcagacctacttctgga
cactatgtttgctacattcgatcctctcctaatatgtggcataagatgaatgattcaagg
gttacttgtgttgaagaagaagctgtgttgtcccaggaagcctacattttgctctatgct
aaacagggtataccttggttttcaactgcaatagaagtgcaaaagccttctgcagaccct
ggaatttctgattcttcaccaaagtctgttttagatgacatagactttgcctccaatctt
gaggtggaaaagagtgccaattgcagcgccaatgaaactaaagatgttgctgatagagct
tcaactcaattctcttgcgattcacagtttgaagttagggttgatgaaccctgtgttgtt
gctgatggaatttctggagtgcctgcaaatgaatcagaatttcatgtatcaaagtccatt
gaccctatagatgatgaccctatgacagatgcttctataccaccattgaggtcaattaat
tgttctgatgaagctacaaatgactgtggttcccctataatgccatccagatctccatcc
ccagacaattgtgataggaacatttcaggatgcggtccacaaactcatttgaaagaggag
aaacgaggtggtgtttgtagaagagcagtaaacaagacacctgagatggatcaaggaaga
attgaagcaatgcgatatgccaaaaagatgcctagtgcacgaggcgcgaaacttatggct
ctactgtctccacaaacaggtaaaatgaagaaaagaatgggatcgtctccttgcaaacgg
gtgagccctaggaccaagcataaccagaaccttatgcacccggttcctgtctcgcgttga
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