Gossypium hirsutum (upland cotton): 107924858
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Entry
107924858 CDS
T04793
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17-like
KO
K14487
auxin responsive GH3 gene family
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107924858
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
107924858
NCBI-ProteinID:
XP_016710939
UniProt:
A0A1U8LCP3
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Position
A02:complement(101025115..101028830)
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AA seq
580 aa
AA seq
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MAMNGYEGGLKMIEELTTNAGQIQDKVLREILSRNAGTEYLRGFLHGQTDKQLFKKNVPI
VTYEDLKPYIDRIVNGETSDILLAEPITGFFLSSGTSGGQRKLMPVTAQVAKKWELFRGL
YESLVIKHIVDINQAGKRMELMFARPEIETPSGLMATSVTASIFKGSGFRASLPKLYTSP
SETIFCPDPNQSLYCQLLFGLIQREEVVMIGSFFASTVLRAIKFLENHWQELCYDIKTGR
LSHQITDSRCRNAASLVMKPNPEQADLIENICNCKSWDGIIRKLWPKARYIAGICTGVMR
QYTAELEFYSGGLPLVSSLYASSEAFCGINIEPLCKPSDVSYTFLPNMAYFEFLPVKNER
DESIEMKSNNEDTELVDLVNVKPDQCYELVVTNSTGLYRYKVGDVLMVSGFHNNAPQFQF
VERKSVVLSVDMEKTSETDLFKAVTEAKALLDPLGFILTEYTSYADTSSVPGHYVLFWEL
KEKEDKHCKELDPKIMVECCFRMEESLHYTYKIYRKRNIIAALEIRVVKQGSFEALMEYC
VSKGTSLSQYKKPSCIKSEEALKILDSRVIGKYFSPKSPL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgaatgggtatgaaggtgggttgaagatgattgaggaactgaccacaaatgct
gggcaaattcaagacaaggtgttgagggaaatactaagtagaaatgcaggaacagagtat
ttaaggggattcctccatggtcaaaccgacaagcaactctttaagaaaaatgttcccata
gttacttatgaagatctcaagccttacatagataggattgttaatggggagacatcagat
atccttttagctgaacccattacagggttctttctaagctctgggacttcaggcgggcag
cgaaagctgatgcctgtcactgctcaagttgctaaaaagtgggaattatttcgtggctta
tacgagtctcttgtgataaagcacattgttgacatcaaccaagccggtaaaagaatggag
cttatgtttgccagaccagagattgaaactcctagtggcctcatggcaacatctgttaca
gccagcatattcaagggcagtggatttagagccagtttacctaagctttacacaagcccc
agcgagaccatcttttgtccagaccccaaccagagcttatactgtcaattactttttggt
ttaatccaacgagaagaggttgtcatgattggttcattctttgcatctacggtgctaaga
gctatcaagtttctagaaaatcattggcaagagctatgctatgacataaaaacgggtcga
ttaagccatcagattacagactctagatgcagaaatgcagcatcattggtcatgaagcct
aatccagaacaggctgacttgatagagaacatatgtaattgtaaatcatgggatggaata
atcagaaagctatggcctaaagcaaggtacattgctggcatctgtacgggtgttatgaga
cagtatactgcagagctcgagttctattctggagggcttcctttagtttcatctttatat
gcttcctcagaagctttttgtgggattaacatagaacctctatgcaaaccttctgatgtc
tcctacacatttctccctaacatggcttacttcgaattccttcctgtgaagaatgaacgc
gatgaatctattgaaatgaaaagcaacaatgaagatactgaacttgttgatcttgtaaat
gtgaagcctgatcaatgttatgaactagttgtcacaaattctacaggattataccgatat
aaagtcggagatgttcttatggtgagtggtttccacaataatgcacctcaattccagttt
gtggagaggaaaagtgttgtcctaagtgttgatatggaaaaaactagcgaaactgacctt
ttcaaggctgtgacagaagcaaaagctcttctcgatccactcgggttcatcttaacagag
tacactagctatgctgatacttcttccgtaccaggtcactatgtcttattttgggagctc
aaggaaaaagaagacaagcattgcaaagagcttgacccaaaaataatggtagaatgttgc
tttagaatggaagagtcattgcattatacatataaaatctataggaaaaggaacataata
gcagctttggagattagggtggtaaagcaaggaagttttgaggcactaatggagtactgt
gtgtccaaaggaacttcattgagccaatacaaaaaacctagttgcattaaatctgaggaa
gccttgaagatattagattcaagagtgataggaaagtatttcagcccaaaatcaccttta
taa
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