Gossypium hirsutum (upland cotton): 107925051
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Entry
107925051 CDS
T04793
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107925051
Spliceosome [BR:
ghi03041
]
Common components
Common spliceosomal components
General mRNP proteins
107925051
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
107925051
NCBI-ProteinID:
XP_040938266
UniProt:
A0ABM2Z6B9
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All DBs
Position
A02:100484360..100490262
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AA seq
581 aa
AA seq
DB search
MDFDEYEYLEKTVEEQEDSKKKTKDGGGVGDKNERSYRKRDSERDEEDDEGKSSSKKSRS
GREEDDEERRDRDKDRRRSSRDRERERERQRDRDRDLERRSSRGREKEKDRERDRERERR
DRDKEKEKEKEREKERREREKERERREKEKEKERERERRERSSSRSRRHESEREREKERD
RERDIDIRDSRRFKDKKEATEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDV
RLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSGA
GTGGVAGPYGAVDRKLYVGNLHFNMTEMQLRQIFEPFGPVELVQLPLDLETGQCKGFGFV
QFAQLEHAKAAQSALNGKLEIAGRTIKVSSVTDHVVTQDTAAKSADFDDDDGGGLALNAQ
SRALLMRKLDRSGIATSITGSLGAPLLNGSAPNPQAVTLPVNGQAAYPTPILPPIMSTTA
LDSVGQPSECLLLKNMFDPATETEPDFDLDIKEDVEEECSKYGRVKHIYVDKNSAGCVYL
RFDSAEAAGKAQRAMHMRWFAGRSISALFMQPQEYEARFKC
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgacgagtacgagtatttggagaaaaccgtggaggagcaggaagattcgaag
aagaagaccaaagacggaggaggagtgggggataagaacgagagaagctataggaagaga
gatagcgagagagatgaagaggatgatgaaggcaagagtagtagcaagaaatcgagaagc
ggtcgcgaagaggatgacgaggagaggcgagatcgtgacaaagatcggcgtagaagcagc
cgtgatagagaaagggaaagggaaaggcagagagatagggatagagatttagagaggagg
agcagtagaggaagggaaaaggaaaaagatagagaaagggatagggaaagagaaaggaga
gatagggataaggagaaagagaaagagaaagagagagagaaggagaggagagagagggaa
aaggagagagagaggagagaaaaggagaaggagaaggaaagggagagagagaggagagag
agaagcagcagtaggtcgaggaggcacgagagtgagcgcgagcgagagaaggagcgggac
agagaacgtgacattgacatcagagacagcaggagatttaaagataagaaggaagcaaca
gagcctgaagctgatcctgagagggaccagagaaccgtttttgcttatcagatgcctcta
aaagcaacagagagagatgtctatgagttcttctcaaaagcaggaaaggtgagggatgtt
cggctgatcatggataggaactcaagacgatcaaagggagttgggtacattgagttttat
gatgtgatgtctgttccaatggcaatagcgttgtctggtcaactgcttcttggtcaacct
gtgatggttaaaccttctgaggctgaaaagaatcttgttcagtccaatacttctggtgca
ggcacaggtggtgttgctgggccatatggagctgttgatagaaaattgtatgtgggtaac
ctgcacttcaatatgacagaaatgcagcttagacagatatttgaaccttttggcccagtt
gagcttgtacaactaccacttgaccttgagactgggcagtgcaaaggttttggatttgtt
cagtttgctcaacttgaacatgcaaaagcagctcaaagtgcattgaatggaaagctggag
attgctggtcgaaccattaaggtttcatctgttacagatcatgttgttacccaagatact
gcagcaaaatctgctgacttcgatgatgatgacggtggtggcttggccttgaatgctcaa
tcaagggcattgcttatgcggaagctggaccgctctggtattgcgacaagcattacgggc
tcccttggagcacccctccttaatgggtcagctccgaatccacaggctgttactttacct
gtcaatggccaagctgcatatccaacaccaattctacctccaatcatgtctactacagca
cttgattctgttggccagcccagtgaatgtttgctgctgaagaatatgtttgatcctgca
actgagacggaaccagattttgatttggatattaaagaggatgtcgaagaagaatgcagc
aaatatggcagggtgaagcatatatatgtagacaagaacagcgctggatgcgtctatctg
cgatttgactccgcagaagcagcaggtaaagctcaacgtgcaatgcacatgaggtggttt
gcaggccgatcaatatcagccttatttatgcaaccccaggagtacgaagcgaggtttaaa
tgctga
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