Gossypium hirsutum (upland cotton): 107925195
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Entry
107925195 CDS
T04793
Name
(RefSeq) transport inhibitor response 1-like protein Os04g0395600
KO
K14485
transport inhibitor response 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107925195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107925195
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107925195
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_6
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
107925195
NCBI-ProteinID:
XP_040935425
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Position
A10:1963598..1968185
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AA seq
586 aa
AA seq
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MEPSELKRSKDSPNLDESTRRSSFPDEVLERVLSLLKSHRDRSSVSLVCKDWYNAERWSR
THVFIGNCYSVSPEIVARRFPKIRSVTLKGKPRFSDFNLVPENWGADIHAWLVVFAAKYP
FLEELRLKRMAISDESLEFLAVSFPNFKALSLLSCDGFSTNGLAAIATHCKNLTELDIQE
NGIDDKGGSWLSCFPESFTSLEVLNFANLSSDINFDALERLVGRCKSMRVLKLNRSVSLE
QLQRLLVNAPQLAELGTGSFSEELTFRQCVELESALSNCKNMHTLSGLWDAKGIYLPALY
PVCTHLTFLNLSYAALRSDELAKLLAHCPRLKRLWVLDTVEDKGLEAVGMNCPLLEELRV
FPADLFDEEIIHGVTEAGFVAVSFGCPRLHYVLYFCCQMTNAAVATIVQNCPDFTHFRLC
IMNPGQPDHITNEPMDEAFGAVVKTCTKLQRLSVSGRLTDLTFEYIGRYAKNLETLSVAF
AGSSDWGMQCVMGGCSKLRKLEIRDCPFGNAALLSGLEKYESMRSLWMSACNVTMNGCRL
LAREMPRLNVEVMKEDGSDDSQADKVYVYRSIAGPRRDAPPSVLTL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggaaccatcggagctgaagaggtcgaaggactcgccgaacttggacgagtcaactcgt
cggtcgtcatttcccgacgaagtgctggagcgagttctctcccttttgaaatcccacagg
gaccggagctccgtttctttggtttgcaaggactggtacaacgcggaacggtggtcgagg
actcacgtcttcatcggaaactgttactcggtttcgccggagatcgtcgcgcggcggttc
ccgaagataaggagcgtgactttgaaggggaaacctaggttttctgacttcaacttggtg
ccggaaaattggggagccgatatccacgcgtggctggtcgttttcgcggctaagtatccg
ttcctcgaagagcttaggcttaagcgaatggcgatcagcgatgaaagcttggagtttctc
gcagtttctttccctaactttaaagctctttcccttttaagctgtgacggttttagcact
aacggacttgccgccattgccactcactgcaagaacttgactgagcttgacatacaggag
aatggcattgatgataaagggggtagttggttgagctgcttcccggaaagcttcacatca
ttggaagtgctcaactttgccaacttgagtagcgatattaatttcgatgctcttgagagg
cttgtaggtaggtgcaagtcaatgagggttttgaagttgaataggagtgtatcgttggaa
cagttacaaagacttcttgttaatgccccacaattagctgagctcggtacgggctcgttc
tcggaagaacttactttccgccaatgtgtagagcttgaaagtgcgttaagtaattgcaag
aatatgcatacgctatctggtttgtgggatgccaaggggatatatctccctgccctgtat
cctgtgtgcacgcatctaacattcttgaacttgagctatgctgctttgagaagcgatgaa
ttggctaaacttctggctcattgtccacgacttaaacgcctatgggtcttggacacggta
gaagacaaggggctggaggctgttggaatgaactgccctttgcttgaggaactacgagtt
ttccctgctgatctgtttgacgaggaaattatccatggagtcactgaagctgggtttgtg
gctgtgtcttttggttgcccgagactccactatgttctctatttttgttgtcaaatgact
aatgctgctgtagcaaccattgtacagaactgccctgattttactcatttccgattatgc
ataatgaacccgggtcaaccggatcatatcacaaatgaacctatggatgaagcttttggt
gctgtggttaagacatgcactaaacttcagaggctttcagtttcaggtcgcttaactgat
ctgacattcgagtatatcggtaggtatgctaagaacttggagaccctctcagtggcattt
gcaggcagcagtgactgggggatgcagtgtgttatgggaggttgttcaaaactaaggaaa
cttgagatacgagattgcccgtttggaaatgctgcactgctgtcaggtttggagaagtac
gaatctatgaggtcactttggatgtcggcctgcaatgtgacaatgaatggttgtaggcta
ttggcaagggagatgcctaggttgaacgttgaggtaatgaaggaggatggaagtgatgat
agtcaagctgataaagtctatgtttatcgttcgattgctggcccacggagggatgcccca
ccatctgttcttactctctga
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