Gossypium hirsutum (upland cotton): 107925203
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Entry
107925203 CDS
T04793
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107925203
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107925203
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
107925203
Protein phosphatases and associated proteins [BR:
ghi01009
]
HAD phosphatases
Fcp/Scp phosphatases
107925203
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
107925203
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPOC_CPL1_2
dsrm
NIF
Motif
Other DBs
NCBI-GeneID:
107925203
NCBI-ProteinID:
XP_016711308
UniProt:
A0A1U8LD63
LinkDB
All DBs
Position
A10:2200769..2207914
Genome browser
AA seq
973 aa
AA seq
DB search
MSMYKSVVCRGDEVLGDVEIYPQQQQLREEEEEYGGKITVMEEEMKEIRIGYLTQGSERC
PPLAVLHTITSTGICFKMESSKDNNYSSSFQDTPPLHLLHSECIRDNKTAVMPMGDCELH
LVAMYSRNSDRPCFWGFNVARGLYDSCLVMLNLRCLGIVFDLDETLVVANTMRSFEDRIE
ALQRKMNTEVDPQRAAGMMAEIKRYQDDKAVLKQYAENDQVVENGKVIKVQSEIVQPLSD
NHQPIIRPLIRLQEKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCT
MAERDYALEMWRLLDPESNLINSKELLDRIVCVKSGLRKSLFNVFQDGICHPKMALVIDD
RLKVWDEKDQPRVHVVPAFAPYFAPQAEANNTIPVLCVARNVACNVRGGFFREFDEGLLQ
KIPEISYEDDIKDIPSPPDVGNYLVSEDDTSASTANKDPPIFDGMADAEVERRLKEAISA
ASTVSSASINLDPRLASSLQFTMPSSSSVPLSAVQSSMASYPNMQFPQAAQVIKPVAPVV
SPEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDHTPPEPAFPPARPAMQVPV
SRAQSRASWFSSDEEMSPRQLNRAVPKEFPLDPERMHMEKHRGPPFFPKVESSSPSDRLL
RENQRLPKEALHRDDRLGLNHTPSSYHSFPGEEMPLGRSSSSHKDLDFESGRTIPNGETP
AGVFQDIAMKCGAKVEFRPALVASMDLQFSIEAWFAGEKVGEGTGRTRREAQRQAAEDSI
KSLANTYLSRIKPDTGSAQGDLSRSANTNENGFPGNLNLYGNQQSSKEESMPFSNAPEPS
RLLDPRLEGSRRSMGSVTALKELCMMEGLGVVFQAQPPASNTLQKDEVYAQVEVDGQVLG
KGTGFTWEEAKMQAAEKALGSLRSMLGPFTQKRQGSPRSLQDMPTKRLKPEFPRVIHRMP
SSGRYHKNAPPVP
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgtacaaatcggttgtgtgtcgaggggatgaagtgttgggggacgttgagatt
tatccacaacagcagcagctaagggaagaagaagaagaatatgggggaaaaataacggtg
atggaagaagaaatgaaggaaatcaggataggatatttgacgcaaggcagtgagagatgt
ccaccactggcagtgttgcataccattactagtactgggatttgcttcaaaatggaatca
tcaaaggacaacaactactcatcttcatttcaagacacgcctccgcttcatcttttgcac
tccgaatgtatcagagacaacaagactgcagtaatgcctatgggagattgtgagctccat
ttggttgcaatgtattctaggaatagcgataggccctgtttctggggattcaatgttgca
aggggactctatgattcttgtcttgtcatgttgaacctaagatgtttaggaattgtattc
gatctggatgaaactctagttgttgcaaatacaatgcgatcatttgaggacagaatagag
gctttgcagcgaaagatgaacaccgaggttgatccacaacgtgctgcaggtatgatggcc
gagattaagcgttatcaagatgataaagccgtattaaagcaatacgcagagaatgatcaa
gttgttgaaaatgggaaggtgattaaggttcagtctgagattgttcaacccttgtctgat
aatcaccaacctattattcgaccactcattcgattacaagagaaaaacattattttgaca
cgcatcaatccacagattcgtgatactagtgttcttgtgagactgagacctgcatgggag
gatctgcgaagctacttgactgcaagagggcgtaaacggtttgaggtttatgtttgtaca
atggctgaaagagattatgctttggaaatgtggagacttcttgatcctgagtcaaatttg
ataaattcaaaagaattgttggatcgtattgtctgtgtcaagtctggtttgaggaaatca
ttattcaatgtctttcaagatggcatatgccatcccaaaatggcattggttattgatgat
cgcttaaaagtttgggatgagaaggatcagcctcgtgtgcacgttgttcctgcattcgct
ccatattttgctcctcaagctgaggcaaataatactattccagttttgtgcgttgcgaga
aatgttgcctgcaatgttagaggtggttttttcagagaatttgatgaaggccttctgcaa
aaaattcctgaaatttcatatgaagatgatattaaagatattccttcgcctcctgatgtg
ggcaactatttggtctctgaggatgacacttctgcttcgacagcaaataaagatccacct
atatttgatggcatggcagatgctgaggttgaaagaagactgaaggaggcaatttcagca
gcctcaacagtttcttcagcaagcattaacctagatccaaggctggcttcttctcttcag
ttcaccatgccatcttctagttcagttccattgtcggcagttcagtcatcaatggcatca
tatccgaacatgcagtttcctcaggcagcacaagtgattaaaccagtggctcctgttgtt
tccccagaaccaagcttgcaaagttccccggctagagaagaaggtgaggttccagaatca
gaattggatcctgatacaaggaggaggcttctgatattgcaacatgggcaagataccaga
gatcacacaccacctgaacctgcatttccccctgcgagacctgcaatgcaagttccagtt
tcacgtgctcaatcacgtgcaagttggttttcttctgatgaggagatgagcccacggcaa
ctgaaccgggcagttcccaaagaatttcctttagatcctgagcgaatgcatatggagaag
catcggggtcctccttttttccctaaggttgagagttctagtccatcagatagacttctt
cgtgaaaatcaaagattaccaaaagaggcacttcatagagatgatcgtctggggttaaac
catacaccgtctagttatcattcttttccaggtgaggagatgccccttggtcgatcatct
tctagtcataaggatcttgactttgaatctggacgaactattccaaatggagaaactccg
gccggagtttttcaagatattgccatgaagtgcggagccaaggtggaattcagaccagct
ttggttgctagcatggacctgcaattctccattgaggcttggtttgctggggagaaagtt
ggtgaaggtactgggagaacaagaagagaagcgcaacgtcaggctgcagaggattctata
aaaagcttagctaatacatatttgtcacgaattaagcctgatactgggtctgcacaaggg
gatttaagtaggtcggccaacacaaatgagaatggctttcctggtaatttgaatttgtat
gggaaccagcaatcctctaaagaggaatctatgccattttcaaatgcaccggaaccatct
aggcttcttgatccaaggctagaaggctccaggagatctatgggttcagtcactgcactt
aaagaactatgcatgatggagggccttggggtagtttttcaagcacagcctcctgcatct
aatacattgcagaaagatgaagtatacgcacaggttgaagtagatgggcaggttttagga
aaagggactggtttcacatgggaagaggctaagatgcaggctgctgaaaaggccctcgga
agtctaagatcaatgctcggtccatttactcagaaacgtcaaggttctccaaggtcattg
caagatatgccaactaaacgcctaaagcctgagttcccacgtgttatacaccggatgccc
tcttctggtagatatcacaagaatgctcctccggttccttga
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