Gossypium hirsutum (upland cotton): 107925230
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Entry
107925230 CDS
T04793
Name
(RefSeq) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107925230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107925230
DNA repair and recombination proteins [BR:
ghi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
107925230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
OmpH
Exonuc_VII_L
DUF4743
SR_plectin_7
Ribosomal_S20p
Motif
Other DBs
NCBI-GeneID:
107925230
NCBI-ProteinID:
XP_016711359
UniProt:
A0A1U8LDW8
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Position
A10:2293037..2297857
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AA seq
927 aa
AA seq
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MQVSTYFLSLQNPPSLSYRHRLCHHYLSKRPFRHKLICLLANSADQRSSELVTTLQSETL
KTLEWPSLCNYLSPFISTSMAFSLTKTGAVPVGQSREASQKLLDQTTSALHALEALKSEP
LDLSVIEDVSEILHSAASGQVLTVRELCRVRRMLGAARAVSEKLAAIAEGGSLERYTPLL
EILQGCNFQLELERKIGFCIDCSLSTILGRASEELELIREERKRNMENLDFLLKEVSVSI
FQAGGIDKPLITKRRSRMCVGVKATYKYLLPGGVVLNVSSSGATYFMEPKEAVELNNIEV
KLSNSEKAEEMAILSLLTSEIAESEAEIKYLLDRLIEVDLAFARAAYARWVNGVCPILSS
KESEMLISNGADNALSIDIEGMQHPLLLGSFLSNSTDFITSNSMGPSVLGNTSGEMTPIK
SSKVVSNFPIPIDIKVQCGTRVVIISGPNTGGKTASMKTLGLASIMSKAGMYLPAKKQPR
LPWFDLVLADIGDSQSLCNSLSTFSGHISQICEILEVASKESLVLIDEIGSGTDPSEGVA
LSTSILQYLKNRVYLAFVTTRYADLSRLKEMDPQYENAAMEFSLETLQPTYQILWGRTGD
SNALTIAKSIGFDGNIIERAKMWVESLMPEKQQERKGVLQQLLMEERNSLEAQFKRAESL
HAEIMKLYHEVSSEAENLEERERALRAKETQKVEQELNAAKSQIETVVQEFENQLQTADS
EELNSLVKKSESAINSILKAHQPGYSFSFTETDTSSYQPVSGEQVHLKGLGNKLATVVAA
SEDDDTVLVQYGKIRVRVEKSNVRPISSSKQNNAISSGQSFERQGEQSREVPSNSDATES
GAITYGPLIQTSKNTVDLRGMRVEEAELQLDMAIAARGSNSVLFIVHGMGTGVIKERALE
MLRNHPRVMKYEQEKPLNYGCTVAYIK
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtctccacttatttcctttccctccaaaatcctccgtctctctcgtaccgccac
cgtctctgccaccactatctctcaaaaagaccctttcggcacaaactcatctgcttgctc
gccaactcagccgatcaacgctcatctgaactcgtcaccactctccagagcgaaacccta
aaaaccttagaatggccttccctttgcaattacctttctcccttcatatctacttccatg
gccttctccctcaccaaaactggcgcagttcccgtgggtcaatcgcgggaagcgtcccag
aagcttctcgaccaaaccacttccgctttgcacgccttggaggccttgaagtcggaaccg
ttggatctctctgtaatcgaagacgtctcggagatccttcattccgcggcttcaggacag
gtgctaacggtaagggagctttgcagagttcgtaggatgctcggtgccgcgagagctgtc
tcggagaagttggcagctatcgctgaaggtggttctttggagaggtacactccattactt
gaaatacttcaaggttgcaattttcagttggagttggagcgaaagataggattttgcata
gactgcagcctttcaactatccttggtagagcaagtgaagaattggagcttattagagaa
gaaaggaagaggaacatggaaaatctggattttctgttgaaagaagtatcagttagtata
tttcaggcgggaggcattgataaacctttaataacgaagaggcggtcaaggatgtgtgtg
ggtgtcaaggctacctataaatatctacttccaggtggtgtggttctaaatgttagcagt
tccggcgcaacatactttatggagcccaaagaagcagttgagttgaacaacattgaagta
aagctttcaaattctgaaaaagctgaagaaatggctatcctaagcctgcttacatctgaa
atagcagaatcagaagctgagataaagtatttgttggatagacttatagaagttgatctt
gcttttgctagagctgcatatgctcgatgggtgaatggtgtctgtccaattttaagttca
aaggaatctgaaatgttaatttctaatggcgcagataatgctttgtcaatagatattgaa
gggatgcaacatccgcttctccttgggtcttttctaagtaattccactgattttatcaca
tccaactctatgggtccatctgttttgggcaatacaagtggtgaaatgactcctataaag
tcttcaaaagttgtatccaactttcccattcctatagatattaaagttcaatgtggaacg
agggtggtcattatttcaggacccaatacaggaggtaaaactgcttcaatgaaaactttg
ggattggcatctattatgtcaaaggcaggcatgtatttgcctgctaagaagcagccaaga
cttccatggtttgatcttgttcttgcagatatcggggacagccaaagtctttgcaacagt
ctttcaacatttagcgggcatatatcacaaatttgtgagatcttggaagtagcctcaaaa
gaatcacttgtcctcattgacgaaattggtagtggaactgatccttcagaaggtgtggct
ctatccaccagtatcttacaatatctaaagaatcgcgtttatttagcttttgtgacaact
cgttatgcggatttaagtcgccttaaggaaatggaccctcagtatgagaatgcagctatg
gaattttctttggagaccttacaacccacttaccagatactctggggtagaactggtgat
tccaatgcattgactattgctaaatcaattggttttgatggaaatataattgaacgagca
aagatgtgggttgagagtctaatgccagaaaagcagcaggagcgcaaaggtgtgctgcaa
caattgctaatggaggaaaggaacagtttggaagctcagttcaaaagagctgaatctctt
catgcagaaattatgaaactttatcacgaggttagtagtgaggcagaaaatcttgaagag
cgtgagagagctctcagggcgaaggaaacccaaaaggttgaacaagaactaaatgccgca
aaatcccaaattgaaactgtagtacaggaatttgagaatcagctccaaactgctgactct
gaggagttgaattcgttggttaaaaaatcagaatctgcgattaactccattctaaaagct
catcaacctggttacagtttctcttttactgaaacagatacaagttcatatcaacctgtg
tctggtgagcaagtccatttaaagggactgggaaacaagttagctactgttgttgcagca
tctgaggatgatgacactgttctagtccaatatggtaaaattagggtccgtgttgagaag
agtaatgttagaccaatttctagtagcaaacagaataatgcgatcagttctgggcagagt
ttcgaaagacagggagaacagagcagagaggtccccagtaattcagatgctacagaaagt
ggtgcaattacttatggcccattaattcagacatcaaagaacactgtagatctccgtggt
atgcgagttgaagaggctgaactccaacttgacatggctatcgcagcaagaggatcaaat
tcagttctcttcattgtgcacggcatgggcactggtgtcattaaggagcgagcactggaa
atgttaagaaatcacccacgcgtgatgaagtatgaacaggaaaaaccattgaattatggt
tgtacggttgcttatatcaagtaa
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