Gossypium hirsutum (upland cotton): 107925291
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Entry
107925291 CDS
T04793
Name
(RefSeq) syntaxin-124-like
KO
K08486
syntaxin 1B/2/3
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107925291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107925291
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107925291
Membrane trafficking [BR:
ghi04131
]
SNARE
Syntaxin (Qa)
Stx-PM
107925291
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
107925291
Exosomal proteins of other body fluids (saliva and urine)
107925291
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
ATG17_like
DHC_N2
STX6_10_61_N
DUF1676
Mit_KHE1
DUF5790
HTH_25
TMPIT
Piezo_THU9_anchor
ALIX_LYPXL_bnd
DUF7535
Spore_III_AB
DUF6548
DUF7310
PNMA
MCPsignal
Spectrin_SYNE1
EssA
Cytochrom_C_2
DUF1664
Motif
Other DBs
NCBI-GeneID:
107925291
NCBI-ProteinID:
XP_016711429
UniProt:
A0A1U8LE30
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Position
A10:complement(1869835..1871669)
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AA seq
307 aa
AA seq
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MNDLISSSFKKYTDLKEQAYLDEMEAGTESVNLDKFFEDVENVKEDMKSVERLYKALQEA
NEECKTAHNAKTMKQLRSRMDTDVEQVLKRVKIIKGKLEALEKSNAVSRNTPGCGPGSSA
DRTRTSVVSGLGKKLKDMMDNFQVLRAKMQSEYKETVERRYFTITGEKPDDDTIENLISS
GESESFLQRAIQEQGRGQIMDTISEIQERHDAVKEIEKNLIELHQIFLDMAALVEAQGQQ
LNDIESHVAHASSFVRRGTEQLQEAREHQKNSRKWMCIAILAAIVLIIVILIPLLPTIIT
LIQKKKM
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacttaatctcgagttcgttcaagaaatacacagacctgaaagaacaggcttac
ctggacgaaatggaggccggaaccgagagtgtaaacctcgataaattctttgaagatgtt
gagaatgtaaaggaagatatgaaaagtgttgaaaggttgtacaaggcattgcaagaggct
aatgaagaatgcaagaccgcccataatgcgaaaacgatgaaacagcttcgttcgcgaatg
gataccgatgtcgaacaagtgcttaaacgggtgaagatcattaaaggaaagctcgaagcg
ctggaaaagtcgaatgcggtgagtcggaacactccaggttgtggccctggttcgtctgcg
gataggactaggacatcggtggttagtgggttgggaaagaaactaaaagatatgatggat
aattttcaagtgttaagagcaaagatgcaatcggagtataaagaaacggtggaacgtaga
tattttaccattacgggggaaaaacccgatgacgacacgatcgagaacttgatctcgagt
ggagaaagcgagagttttctccaaagggctattcaagagcaaggaaggggtcagattatg
gacaccatttctgaaatacaagaaaggcatgatgctgttaaggagatagagaagaacctg
attgaactccatcagatattcttggacatggcggcactcgttgaagctcaaggtcaacaa
ctcaacgacatcgagagccacgttgcgcacgcgagctcctttgtaagaagagggaccgaa
caacttcaagaagctagggaacatcaaaagaactccaggaaatggatgtgtatagcaata
cttgctgcaattgtgctcattatagtcatcctcataccactcttgccaacaattataact
ctcattcaaaagaagaagatgtaa
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