Gossypium hirsutum (upland cotton): 107925293
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Entry
107925293 CDS
T04793
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog 2
KO
K12184
ESCRT-I complex subunit VPS28
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107925293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107925293
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107925293
Membrane trafficking [BR:
ghi04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
107925293
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107925293
Exosomal proteins of other body fluids (saliva and urine)
107925293
Exosomal proteins of colorectal cancer cells
107925293
Exosomal proteins of bladder cancer cells
107925293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
GDH_C
DUF7784
Motif
Other DBs
NCBI-GeneID:
107925293
NCBI-ProteinID:
XP_016711430
UniProt:
A0A1U8L9Z0
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All DBs
Position
A10:1868052..1869684
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AA seq
209 aa
AA seq
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MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYETECQKLIAHFKTLA
FTLKDTVPSIERFADTYKMDCPAAINRLITSGVPATVEHRAAAAASATTSAAIVAECVQN
FITTMDSLKLNMVAVDQVHPLLSDLSASLNKLGILPPDFEGKMKMKEWISRLSKMGAADE
LTEQQARQLHFDLESSYNSFMAALPSAGT
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggaggttaagctctggaatgacaagcgcgaaagagaaatgtatgagaattttgcagag
ctatatgccattatcaaagcaacagagaagcttgagaaggcttatgtaagggatatcatt
tcatcatccgagtatgaaaccgagtgccaaaagcttattgcccatttcaaaaccttggct
tttactctcaaagacacggtccccagcattgaacgctttgcagacacatataagatggat
tgcccagctgctataaaccgacttataacctctggggtgcctgctaccgttgagcaccga
gctgcagccgccgcatccgctactacctcggccgccatcgtggctgaatgcgtgcagaat
tttatcactaccatggactcgttgaagctcaatatggtggcagttgatcaagtgcatcct
ttgttgtctgacctctccgcgtctctcaataagcttggcattttgccaccggatttcgag
gggaagatgaagatgaaggaatggatttcacggttgtcgaaaatgggcgcagctgacgag
ctaacggaacagcaagctaggcaactccactttgacttggaatcttcatacaattccttt
atggctgctttgcctagtgccggtacttga
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