Gossypium hirsutum (upland cotton): 107925452
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Entry
107925452 CDS
T04793
Name
(RefSeq) ubiquitin domain-containing protein DSK2a
KO
K04523
ubiquilin
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107925452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107925452
03051 Proteasome [BR:
ghi03051
]
107925452
Membrane trafficking [BR:
ghi04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
107925452
Proteasome [BR:
ghi03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
107925452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
STI1-HOP_DP
Rad60-SLD
UBA_7
XPC-binding
Ubiquitin_2
Dsc3_N
TBK1_ULD
Rad60-SLD_2
RAWUL
COG2p_C
UBA_NBR1_C
RPW8
UN_NPL4
Motif
Other DBs
NCBI-GeneID:
107925452
NCBI-ProteinID:
XP_016711630
UniProt:
A0A1U8LAK0
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Position
A01:109145750..109150475
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AA seq
551 aa
AA seq
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MGGEGDSSESRLGTSGEDEGVLVNIRCSNGTKFTVRTSLESTVGVFKSLLAQNCDVPADQ
QRLIYKGRVLKDDQTLQSYGLQADHTVHMVRSFAPSSSIPPPAATTNTATPNSTPGVTRG
VGSNEGAGLGASSFPGLNALGGNGGLGLFGSGLPEFEQVQQQLTQNPNMMSELMNTPAIQ
SLMNNPELMRSLIASNPQMREIIDQNPELGHILNDPSILRQTLEAARNPELMREMMRNTD
RAMSNIESSPEGFNMLRRMYENVQEPFMNATTMAGNNGNSPSSNPFAALLGNLGDSQARG
SPNNTSTNGSETTHGQTSPNTNPLPNPWGNTVGGGGTQTNATARSNPAGDARAPGLVGLG
GLGLPDVPPMMNGMPDASQLTQLLQNPALSQMMQSIVSNPQYMNQIMNLNPQLRGMFDLN
PQLREMMQNPEVLHQMFSPETMQQMLGLQQSLLSQLNQQQTTRDSSETGGTTGAPGTAGL
ESLMNMFGGLGAGSLSVPNQPDVPPEELYATQLSQLQEMGFYDTVENIRALRATAGNVHA
AVERLLGNPGQ
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgggtggggaaggcgattcgagtgagtcacgactcggtaccagtggagaagatgaggga
gtgctggttaacatccgctgctcaaatggtacaaaatttacggtgaggaccagcctcgaa
tcaaccgttggagttttcaaatctcttttggctcagaattgcgatgtcccagctgatcag
caacgtttgatttataaaggccgagtcttgaaggacgaccaaacccttcaaagttatggt
ttgcaagctgatcataccgtccacatggttcgtagttttgccccatcttcatctatacct
cctcctgcagctaccacaaatactgcaactcctaattctactccaggggtcacacggggt
gttggttctaatgagggtgctggtctgggagcatcatctttccctggacttaatgcactt
ggtggcaatggaggtttgggtctgtttgggtctggacttcctgaatttgagcaagtacag
caacaactaactcaaaatccaaacatgatgagcgaactaatgaatacacctgctattcaa
agtttgatgaataacccagagttaatgcgtagtttgattgcgagcaatccccaaatgcgt
gagattattgatcaaaacccggagcttgggcatatacttaatgatcctagtattcttcgg
cagacgttagaagctgcaaggaaccctgagctcatgcgtgaaatgatgcggaacactgac
agggctatgagtaatattgaatcctctcccgagggttttaacatgcttaggcgtatgtat
gaaaatgttcaggaaccatttatgaatgctacaactatggctggaaataatggaaatagt
ccgagctcaaacccatttgctgctctattgggcaatctaggtgattctcaagctaggggt
tcacctaacaacacttctacaaatggttctgaaaccactcatggacaaacttccccaaac
acaaatcctcttcctaatccttggggaaacactgttggtggtgggggcacccagaccaat
gctactgcaaggtcaaatcctgctggagatgctagggcaccaggtcttgttggtctggga
ggccttggacttccggatgtaccacccatgatgaatggaatgccagatgcttctcagttg
actcaattgttgcaaaatccagctctatcacagatgatgcagagcatagtgtctaatccc
caatatatgaatcagattatgaatctcaacccgcaactacgcggaatgtttgatttgaat
cctcaattgagagaaatgatgcaaaacccagaagtacttcatcagatgttttcacccgag
acaatgcagcaaatgctaggtttacagcaatcacttctatcccagctcaatcaacaacaa
actacccgggattcatcagagactggtggtactacaggagctccaggtactgctggtctg
gagtcgttaatgaatatgtttggtggtctaggtgctggtagcctgagtgttcccaaccaa
cctgatgttcccccagaagaactctacgctacacaattatcacaattacaagaaatgggt
ttttacgatacggtagagaatatcagagcactacgtgctactgctggaaatgtccatgcg
gcggttgagagacttctaggtaacccggggcagtaa
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