Gossypium hirsutum (upland cotton): 107925470
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Entry
107925470 CDS
T04793
Name
(RefSeq) long chain acyl-CoA synthetase 2 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00061
Fatty acid biosynthesis
ghi00071
Fatty acid degradation
ghi01100
Metabolic pathways
ghi01212
Fatty acid metabolism
ghi04146
Peroxisome
Module
ghi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
107925470
00071 Fatty acid degradation
107925470
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107925470
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ghi01004
]
107925470
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107925470
Enzymes [BR:
ghi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
107925470
Lipid biosynthesis proteins [BR:
ghi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
107925470
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of breast milk
107925470
Exosomal proteins of breast cancer cells
107925470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
107925470
NCBI-ProteinID:
XP_016711664
UniProt:
A0A1U8LER4
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Position
A01:110639072..110644295
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AA seq
667 aa
AA seq
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MSVTYTVKVEDSRPESGKKPSAGPVYRCIYAKYGLLDLPDRMHSPWEFFSESVKRNPNNR
MLGRRQTTDSKQAGPYVWITYQEAYDAALRIGSAMRNQGVNPGDRCGIYGSNCPEWIIAM
EACNCQAVTYVPLYHTLGANAVEFIVNHAEVAIAFVQENKLPAILSCLPACCSYLKTIVS
FANVSSIQKKEAEELGVSLFSWKEFSELVACFNNGSLDCELPQKQKTDICTIMYTSGTTG
EPKGVILTNKAIMTEVLSIDQLIEITDKACSEEDTYFSFLPLAHVYDQIMETYFIKRGSS
IGFWQGDVRYLMDDVQELKPTAFCAVPRVYDRIYTGIVNKIASGGLIRNKLFQYAYNYKL
RNIENGFPQDKASPLLDKLVFDKVRQALGGKVRLMLSGAAPLPRHVEEFLRVSCCSNLSQ
GYGLTESCGGCFTSLANVMSMIGTVGVPITTIEARLESVPEMGYDALSSVPRGEICLRGN
TLFSGYYKRQDLTDEVVIDGWFHTGDIGELQSDGSMKIIDRKKNIFKLSQGEYVAVENIE
NTYSRCPLIASIWVYGNSFESFLVAVVVPERKALEDWGKENGEATDFKSLCENPKARKYI
LNELNSTGQTHHLRGFELLKAVYLEPNPFDMERDLVTPTFKLKRPQLLKYYKDRIDELYS
EGKGAKV
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcacatatacagtgaaggttgaagattcaaggccggaatctgggaaaaagccg
tccgccgggccggtttataggtgcatctatgctaagtatggtctcttggatttgccagac
agaatgcattctccatgggagttctttagcgagtcggttaaacggaatccaaataatcga
atgctgggacgacgacaaaccacagattctaagcaagctggtccttatgtatggatcaca
tatcaggaggcttatgatgcagctctcagaattggttctgccatgaggaaccagggtgtc
aatcctggggaccgatgtggtatatacgggtctaattgtccggaatggatcattgctatg
gaggcttgtaactgtcaagctgtaacatatgtacctctatatcatactcttggtgctaat
gcagtggagttcatcgttaaccatgccgaagttgctatagcctttgttcaagagaacaaa
ctccctgctatcctatcatgccttccagcatgttgttcttacttaaaaaccattgttagc
tttgcaaatgtttctagcatacagaagaaggaagctgaagagcttggtgtatctctgttt
tcatggaaggagttctctgagctggtagcatgcttcaacaatggttctttggattgtgag
cttccacaaaaacagaagactgatatatgcacaataatgtatacaagtggaacaacagga
gaaccaaaaggagtcattctcacaaacaaggcaatcatgacagaagttttgtctatagat
cagcttatagaaattacagacaaagcgtgttcggaagaggatacatatttctctttcctc
cctctggctcatgtctacgatcagataatggagacttatttcatcaaaagaggttcctca
ataggattttggcaaggggatgtccgttatttaatggacgatgtccaggaactaaaacca
accgcattttgtgcggttccaagagtttatgaccgtatatacactggtattgtcaacaaa
attgcatctggtggtctaattcggaataagttgttccagtatgcctataactacaaatta
agaaatatagagaatggattcccacaggacaaagcatctcctctcttagacaaactcgtc
ttcgacaaggtaagacaagcattgggaggcaaagttcgtttaatgctatctggtgcagca
cctttgcctaggcatgtggaggagtttctgcgggtctcctgctgctctaatttatcacaa
ggatatggtttgactgagagctgtggtggatgttttacttcacttgccaatgtaatgtca
atgattggaactgtaggagttccaatcacaaccattgaagcaaggcttgagtcagtgcca
gagatgggatatgatgcactttccagtgtaccacgtggagaaatatgcttgaggggaaac
accttgttctcaggttactacaagagacaggatctaactgatgaagttgttatcgatggc
tggtttcatacaggtgacatcggagaactgcaatccgatggatcgatgaaaatcatcgat
aggaaaaagaatatattcaagctttctcaaggtgaatatgttgcagttgagaacattgag
aatacatactcacgttgccctcttatagcatcgatttgggtttatgggaacagttttgag
tcatttctggtggcagtggtagtcccagaaaggaaggcattagaggactggggtaaagaa
aatggtgaagctactgatttcaagtcattatgtgaaaaccccaaggcaaggaagtacatt
ttaaacgagctaaatagcactggtcagacacatcatctcagaggctttgaactgctaaaa
gcagtgtatttggaaccaaatccgtttgacatggagagggatttggtaaccccaactttc
aaacttaagaggccccaactgcttaaatactacaaggatcgaattgatgaactgtacagc
gaaggcaagggagcaaaggtataa
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