Gossypium hirsutum (upland cotton): 107925474
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Entry
107925474 CDS
T04793
Name
(RefSeq) RHOMBOID-like protein 10, chloroplastic
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107925474
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
107925474
Peptidases and inhibitors [BR:
ghi01002
]
Serine peptidases
Family S54: Rhomboid family
107925474
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
DER1
Motif
Other DBs
NCBI-GeneID:
107925474
NCBI-ProteinID:
XP_016711674
UniProt:
A0A1U8LES4
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Position
A01:109751431..109754104
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AA seq
336 aa
AA seq
DB search
MGSTLPQPFPFKWDLRTEEPTFHLITTAASLRLGNLLRHQLRLGFHLRSSFKKLCHLCNV
PRLNHVWSETISNFMGIGNFRFANDVVWSSCSSYFCFFNGGEQRKYFGNEGNSGSSKMDT
SRRNSFNTRKWTNILLAINVLIYVAQLATQGKLLLWGAKINSLIDKGQIWRLATYSLLHA
NIGHLMVNCYSLNSIGPTVENLSGPRRFLAVYLTSAISSAATSYWFCKAPAVGASGAIFG
LVGSVAVFVMRHRYMIRDAKEDLQHIAQVIFLNMVIGLMSRGIDNWGHLGGLLGGAAVSW
LIGPAWKYESMASDGRRIFSDQPPLFYLTDRKQKPQ
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggggtcaactctgcctcagccattccccttcaagtgggatttacgaactgaagaaccc
acttttcatctcatcaccactgccgcttctcttcgcctcggcaaccttctccgccatcag
ctccgcctagggttccacctccgctcctcgttcaagaaactctgtcatctatgtaatgtg
cccagattgaatcatgtatggtctgaaacaatttccaacttcatgggaattggcaatttt
cggtttgcaaatgatgttgtctggtcctcgtgttcatcttacttttgtttcttcaatggg
ggagaacaaagaaaatattttggaaatgagggtaatagtggatcatccaagatggatact
tccaggagaaattcattcaacacaaggaaatggaccaacatccttttagctattaatgtc
ttaatttatgttgcacaactggcaacacaagggaagctcttgctttggggagctaagatt
aatagtcttattgacaaaggacagatttggaggctggccacatattctcttttgcatgca
aatatagggcaccttatggtcaattgttattctttgaattctattggacctactgtggag
aatttaagtggtccaaggagatttcttgcagtttacttgacatctgctatttcaagtgcc
gctacaagttattggttctgcaaagcacccgcagttggtgcatcaggcgcaatctttgga
ttggttggttctgttgctgtgtttgtcatgaggcatagatatatgatcagagatgccaaa
gaagatctgcaacacatagcacaagttattttcctaaacatggttattggactaatgtca
agaggcattgataattggggtcatctaggaggcttgcttggaggagcagcagtgtcttgg
cttataggacctgcatggaagtacgaatctatggccagtgatggccgaagaatattctca
gaccaaccaccacttttttaccttactgacagaaaacagaaacctcaatga
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